KEGG   Gekko japonicus (Schlegel's Japanese gecko): 107124566
Entry
107124566         CDS       T04299                                 
Symbol
DDX6
Name
(RefSeq) DEAD-box helicase 6
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
gja  Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gja00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107124566 (DDX6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gja03019]
    107124566 (DDX6)
   03036 Chromosome and associated proteins [BR:gja03036]
    107124566 (DDX6)
Enzymes [BR:gja01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107124566 (DDX6)
Messenger RNA biogenesis [BR:gja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107124566 (DDX6)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     107124566 (DDX6)
Chromosome and associated proteins [BR:gja03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    107124566 (DDX6)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 107124566
NCBI-ProteinID: XP_015283539
Position
Un
AA seq 483 aa
MSTARTENPVIMGLSSQNGQLRGPVKPSSGPGGGGTQAQQQINQLKHPNTINNGTQQQAQ
GMPSTLKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV
SQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHV
QMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINL
MEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYS
CFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLH
RIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEE
EKP
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgagtacggccagaacagagaaccctgttataatgggtctctccagtcaaaatggacag
ttgaggggcccagtaaaacccagcagtggtccaggaggcgggggaacacaggctcagcag
cagataaaccagctgaaacatcccaacacaatcaacaatggcactcagcagcaagcccag
ggtatgccctccactctcaaacctggcgatgactggaagaagactttgaaacttcctcca
aaagatctgcggatcaaaacttcggatgtgacttccactaaaggaaatgagtttgaagat
tactgtctgaaacgggagctgctgatgggaattttcgaaatgggctgggaaaagccatct
cctattcaggaggagagcattcctattgctctgtctgggagggacatcttggcaagagca
aagaacggaactggcaagagtggtgcctacctcattcccttacttgaacgacttgactta
aagaaggacaacatacaagcaatggtgatcgttcccacacgagagctggccctacaggtc
agtcagatctgcatccaggtcagcaaacacatgggaggggccaaagtgatggcaaccacc
ggaggaaccaacctgcgtgatgacataatgaggcttgacgatacagtacatgtggtgata
gctacaccagggaggattctggaccttatcaagaaaggagtagcaaaagtggaccatgtc
cagatgattgttctagatgaggcagacaagttgttgtcccaggattttgttcaaataatg
gaggacatcattctcacgctacctaagaataggcagatcttgctatactcagccactttc
cctctaagtgtacagaagtttatgaattcccacttgcagaaaccctatgagattaacttg
atggaggagctgacgctgaagggagttacccagtactatgcctatgttactgagcgccag
aaagtacattgcctcaacacattattctccaggcttcaaattaaccagtcgatcattttc
tgcaactcctcccaacgggttgaactgctagccaagaaaatctcccagctggggtattcg
tgcttctacattcatgcaaagatgaggcaggagcaccgcaatcgagtgttccacgatttc
cggaatggcttatgccgcaatcttgtttgcactgatctgtttacccgaggtattgatatc
caagctgtgaatgttgtgataaactttgattttccaaagctggcagagacatatctccac
cgtattggcaggtcaggtcggtttggccacctcggcctggccatcaacttgatcacctac
gatgatcgattcaacctgaaaagtattgaagagcagctggggacagaaatcaagcccatc
cccagtaacattgacaagagcctgtatgtggcagaataccatagtgaacccgtagaagag
gagaaaccttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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