KEGG T05193: GLN3

Geobacillus lituanicus: GLN3_12595

Entry

GLN3_12595        CDS       T05193

Name

(GenBank) DNA-3-methyladenine glycosylase

K01247

DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

gli Geobacillus lituanicus

Pathway

gli03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:gli00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GLN3_12595
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gli03400]
    GLN3_12595
Enzymes [BR:gli01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     GLN3_12595
DNA repair and recombination proteins [BR:gli03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GLN3_12595

SSDB

Motif

Pfam:

HhH-GPD

Other DBs

NCBI-ProteinID:

ASS87798

Position

2540064..2540930

AA seq 288 aa
MWKRTITVPAPYDFAHALERLSLDPLLAVDRERQRITVPLALDGCFVPVTVEGVGTKDDP
RFVVSAPFPERQDEVMERISHLFQWRTPLVLVYDHFRATELAPLFAEYEGLPLVLDFDLY
FCLIKCLIHQQLHLKVGYRLTERFVKTFGTEVDGVWFYPRPEEVAARSYDDLRALQLSGR
KAEYIVDVSRLIADGKLRLDELEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVFP
PADIGLQRAVEKQFGLQQRPTAKEMAALGERWKPYASYAALYLWRSIE

NT seq 867 nt +upstreamnt +downstreamnt
atgtggaaacgaacgatcactgtgccggcgccgtatgatttcgcccatgcccttgagcgg
ctttcgctcgacccgctgttggccgtggatcgggaacggcagcgcatcaccgtgccgctc
gccctcgacggctgtttcgtgcccgtaacggtggaaggcgtcggcacaaaagatgacccg
agatttgtcgtttcagctccttttcccgagcggcaagacgaggtgatggagcggatttcg
catctgtttcaatggcggacgccgctcgttctggtgtatgatcattttcgcgcgaccgag
ctggcgccgctgtttgccgagtatgaggggctgccgcttgtgctcgattttgatctatat
ttttgcctcatcaaatgtttgatccatcagcaacttcatctcaaagtcggctatcggctg
acggagcggtttgtgaaaacgttcggaacagaagtggatggcgtttggttttacccgcgc
ccggaagaagtggccgcccgttcgtacgatgacttgcgcgccttgcagctgagcgggcgg
aaagcggaatatatcgtcgatgtgtcgcgtctcatcgctgacggaaagctgcggcttgat
gaactcgagcagatggaagacggcgaggtgatggagaggttgaccgccgtgcgcggcatc
ggtccgtggacggtgcaaaacttccttctctttggccttggccgtccaaacgtcttcccg
ccggcggatatcggcttgcagcgggcggttgaaaaacaattcgggcttcaacagcggccg
accgcaaaagagatggcggcgctcggcgagcggtggaagccgtacgccagctatgcggcg
ctttatttatggagaagtatcgaatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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