KEGG T00708: Glov

Trichlorobacter lovleyi: Glov_3636

Entry

Glov_3636         CDS       T00708

Name

(GenBank) 3'-5' exonuclease

K03684

ribonuclease D [EC:3.1.13.5]

Organism

glo Trichlorobacter lovleyi

Brite

KEGG Orthology (KO) [BR:glo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:glo03016]
    Glov_3636
Enzymes [BR:glo01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Glov_3636
Transfer RNA biogenesis [BR:glo03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Glov_3636

SSDB

Motif

Pfam:

DNA_pol_A_exo1 HRDC

Other DBs

NCBI-ProteinID:

ACD97336

UniProt:

B3E3R4

Position

complement(3908542..3909687)

AA seq 381 aa
MPLLRYTVIEHNHQLEQLCAELTDETELALDLEADSMHHYREKVCLLQLSNRAGTWLVDP
LRLSDLSPLRVLLARPGLRTVLHGGDYDIRSLHRDFGIVVQQMFDTMVAAQFTGATEFGL
AALLREHFGIELDKRFQKADWSKRPLTTEMADYAAHDTAHLLELADRLHARLEQLGRREW
VAEECALLVGNRVAEKGNGPLFLNCKGAGKLKPRNLAILEALLQFRDQQAREADRPAFKV
IPAEALLKIAELVPAAVRDMNGIAGLTPRLLGRYGEQLLTVVRQGLAVAEADLPRFPRGR
GEPNPGIKARITRLKQWREGISSRMGLASGLLAPNWLLERIAEQQPVTLEQLQAIPGIRR
WQVGLWGTEMVETLAKETQTA

NT seq 1146 nt +upstreamnt +downstreamnt
atgccgctactgcgctatactgtgatagagcataaccatcagcttgagcagctctgtgct
gagctgactgatgagactgagctggcgcttgaccttgaagccgactcgatgcaccactac
cgggaaaaggtctgcctgttgcagctttcaaaccgtgccggaacctggttggttgatccg
ttacggctttcagatctttcgccactgagggtcttactggcacgaccgggactacgtacg
gtgctgcatggtggcgattatgatatccgctcgctgcatcgcgattttggtattgtcgtg
cagcagatgtttgacaccatggtcgcggcacagtttaccggtgctactgaatttggcctt
gctgcgctgctgcgggaacatttcgggatcgaactggacaagcgttttcagaaggcagac
tggagcaagcgcccgttaaccacagaaatggctgattatgcagcccatgatacggcccat
ttactggagctggcagatcgactgcatgcaaggctggagcagcttggccgcagggaatgg
gtagctgaagaatgcgccctgctggttggcaaccgggttgctgaaaagggcaacgggccg
ctctttctgaactgtaagggcgccggcaagttaaaaccccgtaacctggctatcctggag
gctctactgcagttccgggatcagcaggcgcgggaggccgaccggcccgccttcaaggtt
ataccggcagaggcattgcttaaaattgctgaactggtacctgctgcagttcgtgatatg
aacggaatagcgggactgacaccacgtctacttggccgttatggtgaacagctgctgaca
gtagtccggcaggggcttgccgttgctgaagcagatctgccccgctttccccggggcagg
ggagagcccaatccgggcatcaaggcgaggattacacggctcaagcaatggcgtgaaggg
atcagcagccgtatgggactggcttccggattgctggcgccgaactggttgctggagcgg
attgccgaacagcagccggtgacgctggagcagcttcaggccataccggggatccgccgc
tggcaggtcgggctgtggggtacagagatggttgagactctggcaaaggagacgcagaca
gcatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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