KEGG   Geobacter metallireducens: Gmet_0407
Entry
Gmet_0407         CDS       T00295                                 
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
gme  Geobacter metallireducens
Pathway
gme00300  Lysine biosynthesis
gme00550  Peptidoglycan biosynthesis
gme01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gme00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Gmet_0407 (murE)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Gmet_0407 (murE)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:gme01011]
    Gmet_0407 (murE)
Enzymes [BR:gme01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Gmet_0407 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:gme01011]
 Precursor biosynthesis
  Amino acid ligase
   Gmet_0407 (murE)
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase
Other DBs
NCBI-ProteinID: ABB30650
UniProt: Q39YM4
Position
449113..450648
AA seq 511 aa
MRLEDLARVINPSEAGGSLALEIEGLYCDSRQVRSGGLFFALRGVATDGHDYIVASRDRG
AVAVVVEDPSRVPEGMTWLKVDDARLAMSRAAAAFYGNPTDGIPVVGITGTNGKTTTTYL
VEAVMARAGIPVAVLGTISYRFGDKTIPAPHTTPESVDLQRTIRDLVDRGAQGVVMEVSS
HALEQRRVDGCRFDVGVFTNLTRDHLDYHRDMESYFESKARLFTELLAADDTKPRRAAVI
NVDDPYGARLASDAVAPVVSYGLSPSVMVRAEMVTFSVDGISGTLVTPLGTIPFHSRLLG
RFNLYNILAAVAAGVALGLSPDAIRGGIEGDVRVPGRLERVDNDHGITVLVDYAHTGDAL
ENVLKTVAEIATGRIITVFGCGGDRDRGKRPVMGEIAGRFSDLSIVTSDNPRTEDAGAII
GEILGGIRSLGLREYGAEELITGFDAKGFAAVESRREAIRLAARVARPGDVLLLAGKGHE
DYQIIGTMKHHFDDREEVAAAFRELSSKGQG
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgagactggaagatctggcacgggtcattaatccctctgaagcaggaggatctctggcg
ctggagatcgaagggctctactgcgattcacggcaggtgcggtccggcggtctctttttc
gcgttgaggggcgtggcgacagacggccatgattacattgtcgcctcccgcgaccgtggc
gcggttgccgtggtggtggaggatccgtcgcgggtccccgaaggaatgacctggctgaag
gtcgatgacgcgcgtcttgccatgtcccgtgctgccgcagccttctacggcaaccccacc
gatggtattcccgtggtcggtatcacggggaccaacggaaagacgaccactacgtacctg
gtggaggccgtcatggcccgagccggcatccctgtggcggttctcgggactatcagttac
cgcttcggtgacaagactatcccggctccccacacgactcccgagtcggtagatctgcag
cggaccatacgcgatctggtggaccggggcgcccaaggtgtggtcatggaggtttcctcc
catgcccttgagcagcgacgggtggatggatgccgcttcgatgtcggcgtcttcaccaat
ctcacccgtgaccacctggactatcatcgggacatggagtcgtacttcgaaagcaaggcg
cggctatttaccgagcttctggcagcggacgacacgaaaccccgacgtgccgcggttatt
aacgtggacgacccctatggcgcccgactcgccagtgacgcggttgcgccggtggtgagc
tacgggctgtctccttcagtcatggtccgggccgagatggtcaccttttctgtcgatgga
atctctggtaccctcgttaccccccttggtacgataccgtttcactcgcggcttctgggg
cggttcaacctctacaacatcctggcggctgtggcggctggcgtggccctgggactctcc
ccggatgcaattcgcgggggaatcgagggggatgtccgggtccctggacgccttgagcgg
gttgataacgaccatgggatcacggtgctggtcgattatgcccacacgggcgacgccctg
gagaatgtcctgaagaccgttgccgagatcgccaccggccggatcatcactgtattcggc
tgcggcggagaccgggatcggggaaaacggcccgtcatgggggagattgcagggcgtttc
agcgatctatccatcgtcacctccgacaacccgcgaaccgaggatgccggagcgattatt
ggcgagattctcggcggtatccgttctcttgggctccgggagtatggggcggaagaactc
atcaccggtttcgatgccaaaggatttgctgcggtggaatcgagacgcgaggcaatcagg
ctggccgcccgcgtggcacgtcctggggatgttctgctcctcgctggcaagggacacgag
gactaccagattatcgggacgatgaagcaccacttcgacgatcgggaagaggttgctgcc
gcttttcgggaactgtcatccaaaggacagggatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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