KEGG   Geobacter metallireducens: Gmet_1936
Entry
Gmet_1936         CDS       T00295                                 
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
gme  Geobacter metallireducens
Pathway
gme03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gme00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Gmet_1936 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gme03400]
    Gmet_1936 (xseB)
Enzymes [BR:gme01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Gmet_1936 (xseB)
DNA repair and recombination proteins [BR:gme03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Gmet_1936 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S Phage_TAC_11 CAP_N KxDL
Other DBs
NCBI-ProteinID: ABB32165
UniProt: Q39UA9
Position
complement(2161777..2162007)
AA seq 76 aa
MAVEKFETALKKLEDVVNRLESGELSLDDSLKAFEEGVKMAAFCTKKLDEAEKKVEILLK
KKDGSFAKEPFRLEDD
NT seq 231 nt   +upstreamnt  +downstreamnt
atggccgtagagaagttcgagactgccctcaagaaactggaagacgtggtgaaccggctg
gaaagtggtgaactgtccctggacgactccctcaaggctttcgaggagggagtcaagatg
gctgctttctgcacgaaaaagctggatgaagcggaaaagaaggtggaaatactgctcaaa
aagaaggacggcagttttgccaaggagccgttccggctcgaggatgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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