KEGG   Glycine max (soybean): 100791930
Entry
100791930         CDS       T01710                                 
Name
(RefSeq) putative exosome complex component rrp40
  KO
K03681  exosome complex component RRP40
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100791930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100791930
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100791930
SSDB
Motif
Pfam: RRP40_S1 KH_6 Rrp40_N RRP4_S1
Other DBs
NCBI-GeneID: 100791930
NCBI-ProteinID: XP_003518749
UniProt: I1JE93
Position
2:10813712..10820080
AA seq 240 aa
METKSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKP
NKYWVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRF
EIGTLIYARVVKANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPV
LDALGKKLSFEIAVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLERIH
NT seq 723 nt   +upstreamnt  +downstreamnt
atggagacaaaatcatccagttcctctacaaacttggtagaccaatcagtgtgtcctgga
gatgtgattcttgatctgtctaacatgacaaaccagacaattaaacttggtggtggtcta
cgacaggactgtgatgcgatttctgtaatgaaggctggcagactaaggttctcaaagcct
aataaatactgggttgaaaattctcagaagaggtatgtgccacatgcagaggattctgtt
cttggaattgttgtagactccagatcagataactttcttgttgacataaaagggccagct
ttagcatttttaccagtgcttgcatttgaaggaggaactagaagaaatatacctaggttt
gagataggtactttgatttacgcacgggtcgtaaaagcaaaccctggaatgaatccagag
ttggcatgtactgatgccagtgggaaagcagcagaatttggtgccctaaaagatggctat
atgtttgagtgtacaacgggtctctcaaggatgcttctcagttctcccacatgtccagta
cttgatgctttagggaagaaactgtccttcgagatagcagttggcttaaatggacgtgtt
tgggtcagtgcagcatctccacaaacaactattgttgtagctaatgcgattatgaattca
gagacattgagtggtgctcagcagagaataatggttgaaaagctgctggagaggatccat
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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