KEGG   GENOME: Gracilinema caldarium
Entry
T01573            Complete  Genome                                 
Org code
scd
Name
Gracilinema caldarium DSM 7334 (Spirochaeta caldaria DSM 7334)
Category
Type strain
Annotation
yes
Taxonomy
TAX:744872
  Lineage
Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Breznakiellaceae; Gracilinema
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
Data source
GenBank (Assembly: GCA_000219725.1 Chromosome)
BioProject: 46527
Original DB
JGI
Comment
Isolated in 1990 from cyanobacterial mat samples collected at a freshwater hot spring in Oregon, USA.
Chromosome
Circular
  Sequence
GB:CP002868
  Length
3239340
Statistics
Number of nucleotides:       3239340
Number of protein genes:        2789
Number of RNA genes:              59
Created
2011
Reference
PMID:23961314
  Authors
Abt B, Goker M, Scheuner C, Han C, Lu M, Misra M, Lapidus A, Nolan M, Lucas S, Hammon N, et al.
  Title
Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1(T)), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema.
  Journal
Stand Genomic Sci 8:88-105 (2013)
DOI:10.4056/sigs.3096473

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Ontology (37)   
   KEGG BRITE (37)   
Pathway (253)   
   KEGG PATHWAY (106)   
   KEGG MODULE (147)   
Genome (1)   
   ASSEMBLY (1)   
Gene (23415)   
   KEGG GENES (2928)   
   KEGG MGENES (19144)   
   RefGene (1343)   
DNA sequence (1)   
   GenBank (1)   
Literature (1)   
   PubMed (1)   
Taxonomy (1)   
   TAX (1)   
All databases (23709)   

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