KEGG   Gluconobacter oxydans 621H: GOX1455
Entry
GOX1455           CDS       T00230                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
gox  Gluconobacter oxydans 621H
Pathway
gox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GOX1455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gox03019]
    GOX1455
   03009 Ribosome biogenesis [BR:gox03009]
    GOX1455
Enzymes [BR:gox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GOX1455
Messenger RNA biogenesis [BR:gox03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GOX1455
Ribosome biogenesis [BR:gox03009]
 Prokaryotic type
  rRNA helicases
   GOX1455
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_22 AAA_19
Other DBs
NCBI-ProteinID: AAW61204
UniProt: Q5FQZ2
Position
1591151..1592962
AA seq 603 aa
MPFPDTHPALKRALEARGYEQLTPVQEAVLQPGLDERDLLVSAQTGSGKTVAFGLAIAPT
LLGDADRLPPSPQPMALVIAPTRELALQVQSELKWLYAETGARIASCIGGTDARSEAREL
NRGAHIVVGTPGRLCDHLSRGSLDLSALRCVVLDEADEMLDMGFREELEQLLDAAPAERR
TLLFSATIAREIASLARRYQKNAERIDTVSGAKQHSDITYRCVITQPQEIERSLVNVLRF
YESPTAMVFCNTRMMVNQVQAALLERGFASVAISGEMGQNERSRAIESLRSGQARVCVAT
DVAARGIDVPALSLVIHASIPTAAETLLHRSGRTGRAGRKGTSVLMVPLNQRRRAERLLQ
MAKIQAEWEAVPTADAIAEQDKTRLMHDPILTNAVDDMSDELVNQLVEKYDATKLAAALV
GLYRARLPKVEQIRPMSVEAPRRTERGERAPREEHTMSGEWFKMGVGRTERADPKWLIPL
ICRLGGVQKREIGSIRIDQEQTYFQIADESVARFKSCLAGAEADEVTIEPSEAPAGGMGP
RGRNPGEGKRFGGGGRSGGGFKGGPRGGAGGGYKGRGGSGYGRPKPAAGDGPRGDGSSRK
RRS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgccttttcccgatacccatcctgcccttaagcgcgcccttgaggcacgtggctacgaa
cagctgactcctgttcaggaagcagttctgcagccggggctggacgagcgcgacctgctg
gtttccgcgcagacggggtcgggcaagaccgtcgccttcggcctggccatcgctccgacc
ctgctcggagacgccgatcgccttccgccgtcccctcagcccatggcgcttgtgattgcg
ccgacgcgtgagctggcgcttcaggtccagtccgaactcaaatggctttatgccgaaacc
ggcgcccgcatcgcgagctgcattggcggcaccgatgcccgcagtgaagcccgtgagctg
aaccgcggcgcccatatcgtggtcggaactcccggccgtctgtgcgatcacctgtcgcgt
ggctcgcttgacctgtccgccctgcgttgcgtcgtgctcgacgaagccgacgaaatgctg
gacatgggcttccgcgaggagctggagcagcttctcgatgccgccccggccgagcgccgt
acgctgctgttctccgcaacgatcgcccgcgagatcgcttcgctggcacgccgttaccag
aagaatgccgagcggatcgacacggtgtcgggtgccaagcagcattccgacatcacctat
cgctgcgtcatcacgcagccgcaggaaatcgaacgctcgctcgtcaacgtgctgcgtttc
tacgagagcccgacggccatggtgttctgcaacacccgcatgatggtcaaccaggtccag
gctgctcttctggagcgcggtttcgcctccgtcgccatttccggcgagatgggccagaac
gagcgcagccgtgcgatcgagagcctgcgctccggtcaggcccgggtctgcgttgcgacc
gacgttgcagcacgcggcattgacgtgccggcgctgagcctcgtgatccatgcaagcatc
ccgacggctgccgagaccctgctgcatcgttcgggccgtacgggtcgtgcaggccgcaag
ggcaccagcgttctgatggttccgctgaaccagcgccgccgggccgagcgcctgcttcag
atggcgaagatccaggccgaatgggaagccgttcccacggccgatgccattgccgagcag
gacaagacgcgcctgatgcacgatccgatcctgacgaacgccgtggacgacatgtccgac
gagctggtcaaccagctggtcgagaagtacgacgccaccaagctcgcagccgcgctggtc
ggtctgtatcgtgcgcgtctgccgaaggtcgagcagatccgcccgatgtccgtcgaggct
ccgcgccgtacggagcgtggcgagcgtgcaccgcgtgaagagcacaccatgtccggtgag
tggttcaagatgggcgttggtcgcaccgaacgtgctgatccgaaatggttgatcccgctg
atctgccgtctgggtggcgtgcagaagcgtgagatcggcagcatccgcatcgatcaggaa
cagacctatttccagatcgcggatgagagcgtggcccgcttcaagtcctgcctcgccggc
gcggaagccgacgaagtgacgatcgagccgtccgaggcccctgccggtggcatgggtccc
cgtggccgcaacccgggtgaaggcaagcgctttggcggcggtggccgttcgggcggtggc
ttcaagggcggtccgcgcggtggtgccggcggtggttacaagggccgcggcggttcgggc
tatggccgtccgaagcccgcagccggtgacggtccgcgcggtgacggttcgagccgcaag
cgccgttcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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