KEGG   Gordonibacter pamelaeae: GPA_07070
Entry
GPA_07070         CDS       T02609                                 
Name
(GenBank) N-formylmethionyl-tRNA deformylase
  KO
K01462  peptide deformylase [EC:3.5.1.88]
Organism
gpa  Gordonibacter pamelaeae
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    GPA_07070
Enzymes [BR:gpa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.88  peptide deformylase
     GPA_07070
SSDB
Motif
Pfam: Pep_deformylase DUF6564 DUF3289
Other DBs
NCBI-ProteinID: CBL03566
UniProt: D6E769
Position
complement(680907..681326)
AA seq 139 aa
MIKELVTDEAILSQPCETATAEDAVVAQDLLDTLASLDEAACLAANQIGVAKAVIVYHDE
NEQPHVMYNPVLKQALGAYKTVEGCLTLESESKVTRYERVKVVYDELVDGALVSRKRDFT
GWTAELIQHMIDHCKGKLV
NT seq 420 nt   +upstreamnt  +downstreamnt
atgatcaaagaactcgtgaccgacgaagccatcctctcgcagccgtgcgagaccgccacc
gccgaggacgccgtcgtggcgcaggacctgctcgacaccctcgcctcgctcgacgaggcg
gcgtgcctggcggccaaccagataggcgtggcgaaggccgtcatcgtctaccacgacgag
aacgagcagccgcacgtcatgtacaacccggttctgaagcaggcgctcggcgcgtacaag
acggtcgagggctgcctcaccctggagtcagagtccaaggtcacccgctacgagcgcgtc
aaggtggtctacgacgagctggtggacggcgccctcgtcagccgcaagcgcgacttcacc
ggctggaccgccgagctcatccagcacatgatcgaccactgcaagggcaagctggtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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