KEGG   Gamma proteobacterium HdN1: HDN1F_03400
Entry
HDN1F_03400       CDS       T01300                                 
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
gpb  Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gpb03009]
    HDN1F_03400 (rluD)
Enzymes [BR:gpb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     HDN1F_03400 (rluD)
Ribosome biogenesis [BR:gpb03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HDN1F_03400 (rluD)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 KDM5_C-hel
Other DBs
NCBI-ProteinID: CBL43923
UniProt: E1VGI1
Position
431575..432531
AA seq 318 aa
MTQIQHQATIPDDLSGKRLDQAAAQLFPDYSRARLQEWIKMGALTINQQVGVAKEKVIGG
EQLFLSVELQADERVKPQNISLDIVHEDDSLLIINKPAGLVVHPGSGHSEGTLVNALVNH
APKLAELPRAGLVHRIDKDTTGLLVVAKTLEAHTDLVAQLQAKLVKREYEAIAQGVMTGG
GKVDAPIGRHPTQRTKQAVVSSGREAVTHYRVVARYRAHTHIRLALETGRTHQIRVHMAH
IHYPLLGDPDYGGRLRLPKAASPEFIEALQGFRRQALHAQRLALHHPESGDWVAWEVPLP
EDFVQLLAAIKADHALDG
NT seq 957 nt   +upstreamnt  +downstreamnt
atgactcaaatccagcatcaggcaaccattcctgacgatctttccggcaagcggctggat
caggccgccgcccagctttttcccgattattcgcgcgctcgcttacaagagtggatcaaa
atgggggcgttaaccatcaatcagcaggtgggcgttgccaaagagaaggtcatcggggga
gagcagctattcttgagcgtcgagctacaggccgatgaacgcgtaaagccccagaacatc
tccctcgacattgttcatgaagatgacagtctgctgatcatcaataaacccgctgggctg
gtcgttcatcctggctcggggcatagtgaaggcacgctcgtcaatgcgctcgttaatcat
gcgccgaaacttgccgaactaccgcgcgcagggctcgtacaccgcattgataaagacaca
actgggctattggtcgtcgcgaaaacccttgaagcgcatactgatcttgtcgcccagctt
caagccaaactcgtcaaacgcgagtacgaagccatcgctcaaggcgtcatgaccggtggt
ggaaaagtagacgctcccattgggcgccacccaacccagcgcaccaagcaagccgtcgta
tccagtggccgcgaagcggttactcactatcgtgttgttgcccgttatcgcgctcacacc
cacattcgtcttgccctagaaacagggcgcacgcaccaaattcgcgttcacatggcgcat
atacactatcccttactgggcgaccctgactacggcggccgcctacgtctacccaaggca
gcaagccccgaattcatcgaagcgctgcaggggtttcgacggcaagcattgcatgcacag
cgcctcgcgctccatcaccccgaaagcggcgactgggttgcgtgggaagtgcctttgcca
gaggattttgtgcaactgctggcagcgattaaagcagaccatgcgctggatggataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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