KEGG   Gamma proteobacterium HdN1: HDN1F_12150
Entry
HDN1F_12150       CDS       T01300                                 
Name
(GenBank) Conserved hypothetical protein
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
gpb  Gamma proteobacterium HdN1
Pathway
gpb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gpb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HDN1F_12150
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gpb02044]
    HDN1F_12150
Secretion system [BR:gpb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HDN1F_12150
SSDB
Motif
Pfam: T6SS_HCP Staphopain_pro
Other DBs
NCBI-ProteinID: CBL44798
UniProt: E1VJ06
Position
complement(1505371..1505889)
AA seq 172 aa
MPTEIYMSINDPDACLTEGACSKESIGSFFKAEHDEEALILAFEHKVSVPINNLTGQVTG
TRKHEYLRVTKFIDKSSPLLLNTVTAPTELEVEFQFFRTPDETSAGEPVHYYTVALKRAK
IVSIESISPNIMDVATEGYMPYEVVTFTYGQIQADHVVCGTNAIDDWSGEGS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgccaaccgagatttatatgtctatcaacgatccagacgcctgcctaaccgaaggtgcc
tgctccaaagaaagcatcggttcctttttcaaggccgagcacgatgaggaagcactcatc
ctcgcctttgaacacaaagtcagtgtgccaattaacaatctcacagggcaggttacaggc
acacgcaaacatgaatatttgcgcgttacaaaattcattgacaaaagctcaccgctattg
ctgaacaccgtcaccgcccccacggaactggaagtggaatttcagtttttccgcactcca
gatgaaacgagcgcaggcgagcccgtacactattacaccgtagccctcaaacgcgccaaa
attgtcagcatcgaatccatttcgcccaacatcatggacgttgcaaccgaaggctacatg
ccctacgaagtggtcaccttcacctacgggcagatccaggccgaccacgttgtatgcggc
accaatgcgatcgacgactggtcgggtgaaggctcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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