KEGG   Geobacter pickeringii: GPICK_11270
Entry
GPICK_11270       CDS       T03568                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
gpi  Geobacter pickeringii
Pathway
gpi03420  Nucleotide excision repair
gpi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GPICK_11270
   03430 Mismatch repair
    GPICK_11270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpi03400]
    GPICK_11270
Enzymes [BR:gpi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GPICK_11270
DNA repair and recombination proteins [BR:gpi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GPICK_11270
   MMR (mismatch excision repair)
    Other MMR factors
     GPICK_11270
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 AAA_11 ResIII
Other DBs
NCBI-ProteinID: AJE03856
UniProt: A0A0B5BIK6
Position
complement(2506798..2508840)
AA seq 680 aa
MSKFDLSTLNPPQRAAAEHTEGPLLVLAGAGSGKTRVITFRIGHLLLDRKVRADNILAVT
FTNKAAGEMKERVRDLVGRAKCKGMVISTFHSLGVKILRRDIERLGYKKNFGIYTTSDQL
GLIRQAMREVNADGKKHDAEGILWRISGWKNALIPPERALPRYEDPDELLACDVYPIYQR
LLKACNAIDFDDIIMLTVGLLQGHPEVLEHWQERFRYIMVDEYQDTNASQYLFISLLAKK
YRNLCVVGDDDQSIYGWRGADVGNILDFEKDYPGCRVVKLEQNYRSTGTILEAANHVIRN
NVKRKEKRLWTDSGEGRPIDLVTAQDDEEEASLVVERIQMERYQHNLAFSDFAILYRTNS
QSRAFEEQLRFEDIPYVLVGGMQFYERKEVKDALSYLRVIDNPLDEQALLRIVNFPRRGI
GDGTVLRINQWSLEQSCHLMEAFGRVGEIEGINEPTREKVLAFHRLITGATEDFRRPGDL
AGRVKRLFDRLGIEEELYRTIEEPATARKKVENVEQVINSMAGYEERIPGATLSGFLEKV
SLMDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPFVFLVGFEEEILPHKKSMEEGGTID
EERRLCYVGITRARRHLTVTRCLHRKKYGKLLERQPSRFLEEIPERLLQFHEGGAKKAAT
EEEQEAMAQDFFARMRAKLG
NT seq 2043 nt   +upstreamnt  +downstreamnt
gtgtcaaagttcgatctttccaccctcaaccctccccagcgggccgccgcggagcatacg
gaggggccgctgctggtcctggccggggcggggtccggcaagacccgggtcatcaccttc
cggatcggccacctcctcctcgaccggaaggtgcgggccgacaacatcctggcagtcacc
ttcaccaacaaggcggccggcgagatgaaggagcgggtccgggacctggtgggacgggcg
aagtgcaaggggatggtcatctctacctttcactccctgggggtgaagatcctgcgccgg
gacatcgagcggctcggctacaagaagaacttcggcatctacaccacctccgaccagctc
ggtctcatccgccaggcgatgcgcgaggtgaacgccgacggcaagaagcacgacgccgag
gggatcctctggcggatctcggggtggaagaacgccctgatcccccccgagcgggcgctc
ccccgctacgaggaccccgacgagctcctcgcctgcgacgtctaccccatctaccagcgg
ctcctcaaggcatgcaacgccatcgacttcgacgacatcatcatgctgacggtggggctc
ctccaggggcaccccgaggtgctcgaacactggcaggagcggttccgctacatcatggtg
gacgagtaccaggacaccaacgcctcccagtacctcttcatctcgctgctggcgaaaaag
taccggaacctctgcgtggtgggggacgacgaccagtccatctacggctggcgcggggcg
gatgtggggaacatcctcgacttcgagaaggactacccggggtgccgggtggtgaagctg
gagcagaactaccgctccaccggcactatcctggaggcggcgaaccacgtcatcaggaac
aacgtgaagcggaaggagaagcgcctctggaccgattccggcgaggggcgccccatcgac
ctcgtcaccgcccaggacgacgaggaggaggcctccctggtggtggagcggatccagatg
gagcgctaccagcacaacctcgccttcagcgacttcgccattctctaccggaccaactcc
cagagccgcgccttcgaggagcagctccgcttcgaggacatcccctacgtgctggtgggg
gggatgcagttctacgagcgcaaggaggtgaaggacgccctctcgtacctgcgggtgatc
gacaaccccctggacgagcaggcgctgctgcgtatcgttaactttccgcggcgggggatc
ggcgacgggacggtgctgcggatcaaccagtggtccctggagcagtcgtgccatctgatg
gaggccttcggccgggtgggggagatcgaggggatcaacgagccgacccgggagaaggtc
ctcgccttccaccggctcatcaccggcgcgacggaggatttccgccgtcccggcgacctg
gcggggcgggtgaagcggctcttcgaccgtctcgggatcgaggaggagctctaccggacc
atcgaggagccggccacggcccggaagaaggtggagaacgtggagcaggtcatcaactcc
atggcggggtacgaggagcggatccccggcgccaccctctcggggttcctggagaaggtc
tcgctgatggacgaggaccgcttcagcggcaaggacaagaaggagcacggccgggacgcg
gtgaccctcatgtcgctccattccagcaaggggctggagtttcccttcgtcttcctggtg
gggttcgaggaggagattctcccccacaaaaaatcgatggaggaggggggtaccatcgac
gaggagcgccggctctgctacgtcggcatcacccgcgcccggcggcacctcaccgtcacc
cgctgtctccaccggaagaagtacggcaagctcctggagcgccagccgtcgcggtttctg
gaggagatcccggagcggctcctccagtttcatgaagggggggcgaagaaggccgccacc
gaggaggagcaggaggcgatggcgcaggatttcttcgcccggatgcgggcgaagctggga
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system