KEGG   Gordonia polyisoprenivorans: GPOL_c19360
Entry
GPOL_c19360       CDS       T01719                                 
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
gpo  Gordonia polyisoprenivorans
Pathway
gpo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GPOL_c19360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpo03400]
    GPOL_c19360
Enzymes [BR:gpo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GPOL_c19360
DNA repair and recombination proteins [BR:gpo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GPOL_c19360
SSDB
Motif
Pfam: H2TH zf-FPG_IleRS Fapy_DNA_glyco
Other DBs
NCBI-ProteinID: AFA72977
UniProt: H6MX55
Position
2203934..2204737
AA seq 267 aa
MPEGHTLHRLARRQQKLFGGQRVRVSSPQGRFAEGAAVVDGMEFHRAQAWGKHLIQRYRD
GKRTQLLHVHLGLYGSFSELAVPMGEPVGQVRMRIVGDEVGTDLRGPTACELYTPADLED
LVARLGPDPLRSDADPERAWQAIHRSSRPIGALLMDQKVMAGVGNVYRAEVLFRARLDPM
RAGRTVDREAFDDMWADLVALMRIGVRRGRIHVIRPEDDHGPGSYAQDRPRTYVYRRTGE
PCRICRTPIATTELVGRNLYWCPHCQR
NT seq 804 nt   +upstreamnt  +downstreamnt
atgcctgaggggcataccctgcatcgcctcgcccggcgtcaacagaagctcttcggtggg
cagcgggtgcgggtgtcgagcccgcaggggcgttttgccgagggcgccgcggtggtcgac
ggcatggagttccatcgcgcgcaggcgtggggtaagcacctcattcagcgctaccgcgac
ggcaagcggacccaactgctgcacgtccacctcgggctctacggctcgttctccgaactc
gcggtgccgatgggggagcccgtcggacaggtccggatgcggatcgtcggagacgaggtg
ggcaccgacctgcgcgggccgaccgcctgcgagttgtacacgcctgccgacctcgaggac
ctcgtcgcgcggctcggcccggatccactacggtccgacgccgacccggagcgtgcgtgg
caggcgatccaccggtcgtcacgaccgatcggcgccctgctgatggatcagaaggtgatg
gccggcgtgggtaacgtctatcgtgccgaggtcctttttcgtgcacgtctcgacccgatg
cgggccgggcgcaccgtcgatcgggaggccttcgacgacatgtgggccgacctcgtcgcc
ctcatgcgaatcggtgtgcggcgcgggcgaattcacgtgattcggccggaggacgatcac
gggccggggtcgtacgcacaggatcggccacgcacctatgtgtaccggcgcaccggagaa
ccctgtcggatctgccgaaccccgatcgcgaccaccgaactcgtgggccgaaacctgtac
tggtgtccccactgtcagcggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system