KEGG   Gordonia polyisoprenivorans: GPOL_c38590
Entry
GPOL_c38590       CDS       T01719                                 
Name
(GenBank) putative ABC peptide transporter, ATP-binding component
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
gpo  Gordonia polyisoprenivorans
Pathway
gpo02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GPOL_c38590
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:gpo02000]
    GPOL_c38590
Transporters [BR:gpo02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    GPOL_c38590
SSDB
Motif
Pfam: ABC_tran AAA_21 oligo_HPY SMC_N AAA_22 AAA_16 Sigma54_activat AAA_29 nSTAND1 Mg_chelatase nSTAND3 NACHT ATP-synt_ab RsgA_GTPase AAA_13 DUF87 PRK AAA_24 Sigma54_activ_2 FtsK_SpoIIIE AAA_7 MMR_HSR1 Dynamin_N
Other DBs
NCBI-ProteinID: AFA74870
UniProt: H6N4T1
Position
complement(4399411..4401012)
AA seq 533 aa
MSPVSDLPVLDVTDLRVAYRTNGIETEAVRGVDLTVARGETVAVVGESGSGKSSVAQAII
GLLPRTAHSTGRVHLGDLRIDELGSRAMNRIRGARIGLVPQDPGTALNPVQRVGDQVAEV
LHIHGRAARKTARIHALEHLADAGIDDPEVRYHQLPHQLSGGQRQRVLIAMAMACEPELI
IADEPTSALDVTVQRRILDHLAARAADSGTSILLITHDIGVAADRADRLVVMSGGQIVES
GPTAQVLTEPRHAYTRRLIADAPALTSGTLAPPRDDDAPVVARAEHISRSFRIGRGNGLT
AVDDVSLAARAGQTLAVVGESGSGKTTTARILAGLETHESGLVEAGDRRGDVGFVYQNPF
SSMNPKLTVEQIISEPLRGVPRAQRRHRVDELLAAVALEPGHARRLPTALSGGQRQRVAI
ARALATTPKLLILDEPVSALDVTIQAQVLRLLADLQRHHGIAYLFISHDLAVVRQISHRV
AVMRAGRIVEEGTVEEVFDDPRHDYTRALLAAIPGAGRTPGSATNLPKESAHA
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgagtccggtatccgatctccctgtcctcgacgtgaccgatctgcgcgtggcgtaccga
accaacggcatcgagaccgaggcggtccgcggagtcgatctcacggtggcgcggggcgag
accgttgccgtggtcggtgagtcaggatccgggaaatcatcggtggcgcaagcgatcatc
ggactcctaccgcgcacggcgcactccaccggccgcgtgcacctcggagatctgcggatc
gacgagctcggttcccgcgccatgaaccggattcggggcgcacggatcggcctggttccg
caagacccgggcaccgcactcaatcccgtgcaacgcgtgggtgatcaggtcgccgaagtc
ctgcacatccacggtcgcgccgcccgaaagacggcccgcatccacgcgctcgagcacctc
gccgacgccggcatcgacgatccggaggtgcgttaccatcaactaccgcaccaactctcg
ggcggacaacggcagcgtgtgctgatcgcgatggcgatggcgtgcgaacccgagctgatc
atcgccgacgaacccacgagcgccctcgacgtcaccgtgcagcgccgcatcctcgatcac
cttgccgcccgcgccgccgatagcggcacctcgatcctgttgatcacccatgacatcggg
gtggccgccgaccgcgccgatcggctcgtcgtcatgtccggcggacagatcgtcgaaagt
ggtccgacagcacaggttctcaccgagcctcgccatgcctacacccggcgactgatcgcc
gacgcaccggcactcacctcgggcacgctggccccaccccgcgacgacgatgcaccggtc
gtcgcacgtgccgaacacatctcgaggtcgttccggatcggtcgcggcaacgggttgacc
gccgtcgacgacgtgtcgctggcggcacgcgccgggcaaaccctggcggtggtgggggag
agcgggtcgggcaagacgaccaccgcccgcatcctggccggtctggagacccacgaatcc
ggcctcgtcgaggccggtgatcgtcgcggcgatgtcggcttcgtctatcagaaccccttc
tcgtcgatgaacccgaaactgactgtcgaacagatcatctccgaaccgttgcgtggggtc
ccccgagcacagcgccgacatcgcgtggacgaactcctcgcggcggtcgcactcgaaccg
ggtcatgcgcgccgcctgcccaccgcgctgtcgggtgggcagcggcagcgggtggcgatc
gcgcgtgccctggccaccaccccgaagctactcatcctggacgagccggtctccgcgctc
gacgtcaccatccaggcgcaggtcctgcgactgctcgccgatcttcaacgccaccatggc
atcgcctatctgttcatctcgcacgacctggccgtcgtccggcagatcagtcaccgggtg
gcggtcatgcgtgccggccgcatcgtcgaggaggggacggtcgaggaggtcttcgacgat
ccgcgccacgactacacccgtgcgctcctcgccgccatccccggagcgggccgtaccccc
ggttccgccaccaacctccccaaggagtccgctcatgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (32)   

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