KEGG   Gordonia polyisoprenivorans: GPOL_c41900
Entry
GPOL_c41900       CDS       T01719                                 
Name
(GenBank) putative ATP-dependent Clp protease, ATP-binding subunit ClpC
  KO
K03696  ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
gpo  Gordonia polyisoprenivorans
Brite
KEGG Orthology (KO) [BR:gpo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:gpo03110]
    GPOL_c41900
Chaperones and folding catalysts [BR:gpo03110]
 Heat shock proteins
  HSP100
   GPOL_c41900
SSDB
Motif
Pfam: AAA_2 Clp_N AAA_lid_9 ClpB_D2-small AAA AAA_5 AAA_16 Sigma54_activat AAA_22 bpMoxR TniB UVR ATPase_2 nSTAND3 AAA_18 IstB_IS21 RsgA_GTPase TsaE AAA_3 NACHT DNA_pol3_delta2 ABC_tran AAA_19 Torsin T2SSE AAA_23
Other DBs
NCBI-ProteinID: AFA75196
UniProt: H6MTW5
Position
complement(4764969..4767512)
AA seq 847 aa
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEGVR
SQVEEIIGQGQQAPSGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVA
AQVLVKLGADLNRVRQQVIQLLSGYQGKEPQEAGTGGRSSESGTPSTSLVLDQFGRNLTA
AAAEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVNGKVPE
TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEG
AIDAASILKPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPSVEHTIEILK
GLRDRYESHHRVSITDGALVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPD
LREFDERIADARKEKESAIDAQDFEKAAGLRDKEKQLVAERAEREKQWRSGDLDVVAEVD
DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLK
DPKRPSGSFIFAGPSGVGKTELSKALANFLFGEDDALIQIDMGEFHDRFTASRLFGAPPG
YVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHSEIYNTLLQVLEDGRLTDGQGRTVDFKNT
VLIFTSNLGTADISKAVGLGFSKGDDSKSNYERMKLKVNDELKKHFRPEFLNRIDDVIVF
HQLTKDEIIQMVDLMINRVETQLKNKDMAIELTDRAKSLLAKRGFDPVLGARPLRRTIQR
EIEDQLSEKILFNELTPGQIVLVDVDNWDGEGEGEDAKFTFTGSEKPRELPDAPVELSKA
GDAGSES
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgttcgaacggttcaccgaccgcgctcggcgggttgtcgtgctcgcccaagaagaggcg
cggatgctcaaccacaactacatcggcaccgagcacatcctgctcggcctgatccacgag
ggcgaaggcgtcgccgccaaggccctcgaatcgctcggcatctccctggaaggggtccgc
agtcaggtcgaggagatcatcggtcagggccagcaggcgccgtcggggcacatcccgttc
accccgcgcgccaagaaggtcctcgagctctcgctgcgtgaggcgctgcagctcggccac
aactacatcggcaccgagcacatcctgctcggcctcatccgcgagggtgagggcgtcgcc
gcacaggtgctcgtcaagctgggcgccgaccttaaccgggtgcgccagcaggtcatccag
ctgctgtcgggttaccagggcaaggagccgcaggaggccggcacgggtggccggtccagc
gagtccggcaccccgtcgacgtcgctggtcctcgaccagttcggcagaaacctgaccgcc
gcggccgccgagggcaaactcgaccccgtcatcggccgcgagaaagagatcgagcgggtc
atgcaggtgctgtcccgccgcaccaagaacaacccggtgctgatcggcgagcccggcgtc
ggcaagaccgccgtcgtcgagggcctcgcgcaggcgatcgtcaacggcaaggtgcccgag
acgctcaaggacaagcagctctacaccctcgacctcggatcgctggtggcgggcagccgc
taccgcggtgacttcgaggaacgcctcaagaaggtcctcaaggagatcaacacccgcggt
gacatcatcctgttcatcgacgagctgcacacgctcgtcggtgccggtgccgccgagggc
gcgatcgacgccgccagcatcctcaagccgaagctggcccgcggtgagctgcagaccatc
ggtgccaccaccctcgacgagtaccgcaagtacatcgagaaggacgccgcactcgagcgc
cggttccagccggtgcaggtcggcgagccgtcggtggagcacaccatcgagatcctcaag
ggtctgcgcgaccgctacgagagccaccaccgcgtgtccatcaccgacggtgcgctcgtc
gccgcggccactctggccgaccgctacatcaacgaccggttcctgccggacaaggcgatc
gacctcatcgacgaggccggtgcgcggatgcgcatccgccggatgaccgcgccgccggac
ctgcgcgagttcgacgagcgcatcgccgacgcccgcaaggagaaggaaagcgccatcgac
gcgcaggacttcgagaaggccgccggcctgcgggacaaggagaagcaactcgtcgccgag
cgtgccgagcgtgaaaagcaatggcgcagtggtgatctggacgtcgtggccgaggtcgac
gacgagcagatcgccgaggtgctgggcaactggaccggtatcccggtgttcaagctcacc
gaggaggagaccacgcgtctgctccgcatggaggacgagctgcacaagcggatcatcggc
caggaggacgcggtcaaggccgtctccaaggcgatccgtcgtacccgcgcgggtctcaag
gaccccaagcgcccgtccggctcgttcatcttcgccggcccgtccggtgtgggtaagacc
gagctgtccaaggcgctcgcgaacttcctgttcggcgaggacgacgccctgatccagatc
gacatgggcgaattccacgaccgcttcaccgcgtcgcgcctgttcggtgcccctcccggc
tacgtcggctacgaagagggcggccagctcaccgagaaggtgcgccgcaagccgttctcg
gtggtcctgttcgacgagatcgagaaggcccactcggagatctacaacaccctgttgcag
gttctcgaggacggtcgtctcaccgacggccagggtcgcacggtcgacttcaagaacacg
gtgctgatcttcacctcgaacctcggtaccgccgacatctcgaaggccgtgggactgggc
ttcagcaagggtgacgactcgaagtcgaactacgagcggatgaagctgaaggtcaacgac
gagctgaagaagcacttccgcccggagttcctgaaccgtatcgacgacgtcatcgtcttc
caccagctgacgaaggacgagatcatccagatggtcgatctgatgatcaaccgcgtcgag
acgcagctcaagaacaaggacatggcgatcgagctcaccgatcgggccaagtcgttgctg
gccaagcgcggcttcgacccggtgctcggtgcccggccgctgcgtcggacgatccagcgc
gagatcgaggatcagttgagcgagaagatcctgttcaacgagctgaccccgggacagatc
gtgctggtcgacgtcgacaactgggacggcgaaggcgagggcgaggacgccaagttcacc
ttcaccggctcggagaagccgcgtgagctgcccgacgccccggtcgagctgagcaaggca
ggtgacgccggcagcgagagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (33)   

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