KEGG T02535: C427

Paraglaciecola psychrophila: C427_3840

Entry

C427_3840         CDS       T02535

Name

(GenBank) RluA family pseudouridine synthase

K06180

23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]

Organism

gps Paraglaciecola psychrophila

Brite

KEGG Orthology (KO) [BR:gps00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gps03009]
    C427_3840
Enzymes [BR:gps01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     C427_3840
Ribosome biogenesis [BR:gps03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    C427_3840

SSDB

Motif

Pfam:

PseudoU_synth_2 S4 S4_2 TruB_N

Other DBs

NCBI-ProteinID:

AGH45945

UniProt:

K6Z2C5

Position

complement(3697880..3698863)

AA seq 327 aa
MSTPHEKIQLQANVPENLFGKRLDQALAEMFPDYSRSRIKEWILANYVKVDGQILNKPRE
KLIGEELIEIDAQIEMQVQHKGQDIDLNIVYEDEHILVINKPMNLVVHPGAGNSDGTVLN
ALLNHAPEIANVPRAGIVHRLDKDTTGLMVVAKTIPAQTHLVEQLQAREISREYEAVVVG
TMVAGGTVDEPIGRHPTKRTSMAVRESGKPAMTHYRVKEKFRAHTYIRLKLESGRTHQIR
VHMSHLRYPLVGDQAYGGRPRPPKACNENMVNMLRMFRRQALHAIQLELTHPVTGEWLSW
QAPLPEDFVALLDVLREDKSEHGSGEV

NT seq 984 nt +upstreamnt +downstreamnt
atgtctaccccacatgaaaaaattcaattacaggctaatgtgcctgaaaacttatttggt
aaacggttagatcaagctttggccgaaatgttccctgattattcaagatcacgcataaaa
gagtggattttggctaattacgttaaagtcgacgggcaaatactcaataaacctagagaa
aaattaataggtgaagagcttattgagattgatgcccaaattgaaatgcaagttcaacat
aagggccaagatattgatttaaacatcgtgtatgaagatgaacatattttggtgattaac
aaacctatgaacctagtggtgcatcctggagctggcaacagtgacggcacagtcctgaat
gctttactcaatcatgcacctgaaatcgccaatgtaccgcgtgctggtattgtacacaga
cttgataaagatacgaccggtttaatggtagtagctaaaactattcctgctcaaacccat
ttagtcgagcaactacaggcaagagaaattagccgcgaatatgaggccgttgtagtgggt
actatggtcgctggtggaacggtcgatgaacctatcggacgtcatcctactaagcgcact
agtatggctgtgcgagagtcaggcaaacctgctatgacacattaccgtgtaaaagaaaaa
tttcgtgcccatacttatattcgattaaaattggaatctgggcgtactcaccaaattcgc
gtacatatgtcgcacctccgttatcccttagttggtgaccaagcttatggaggacgacct
agaccaccaaaagcttgtaacgaaaatatggttaacatgttaagaatgttccgtagacaa
gcattacacgcaattcagcttgaattgactcatccagtaacaggtgaatggttaagttgg
caagctccgttacctgaagattttgtggcacttttagacgttttaagagaagacaaatct
gagcacggcagcggagaagtgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

Download RDF

DBGET integrated database retrieval system