KEGG   Gibbsiella quercinecans: AWC35_10650
Entry
AWC35_10650       CDS       T05060                                 
Symbol
uvrD
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu03420  Nucleotide excision repair
gqu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AWC35_10650 (uvrD)
   03430 Mismatch repair
    AWC35_10650 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gqu03400]
    AWC35_10650 (uvrD)
Enzymes [BR:gqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AWC35_10650 (uvrD)
DNA repair and recombination proteins [BR:gqu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWC35_10650 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     AWC35_10650 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 Viral_helicase1 AAA_22
Other DBs
NCBI-ProteinID: ATA22420
UniProt: A0A250B859
Position
complement(2345435..2347597)
AA seq 720 aa
MDVSDLLDSMNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRIIRALNVDEKQWPPRQAMWYINGKKDDGLRPQHIESYGNPVEATLLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILNHYRERFTNILVDEFQDTNRIQYAWIRLLAGDR
ANVMIVGDDDQSIYGWRGAQVENIQRFLKDFPAAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTDGAEGEPISIYCAFNELDEARFVVNRIKTWQDNGGALNNCAILYRSNAQS
RVLEEALLQSAMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRALLQDKALAGRAASSLQRFVELVDALAYETAEMPLHVQ
TDRVIRDSGLFVMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLLPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFTQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLTYAETRRLYGKEAYHRPSRFIGELPEECVEEVRLRASVSRPVSHRRMG
TPISENDSGYKLGQRVRHPKFGEGTIVNLEGSGEHCRLQIAFQGEGIKWLVAAYAKLETQ
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggacgtttccgatctgctcgacagcatgaatgataaacaacgcgaagccgtggcggcg
ccacgcagcaacctgttggtgctggccggtgcgggcagcgggaaaacccgggtgctggtg
caccgcatcgcttggctgctggcggtggagaactgttccccgtattccatcatggcggtg
acattcaccaacaaggcggcggcggaaatgcgccaccgcattgagcacctgatcggcacc
agccagggcgggatgtggatcggcaccttccacggcctggcccaccgcctgctgcgcgcc
caccatatggacgccaacctgccgcaggatttccaaatcctcgacagcgaagatcagctg
cggctgctcaagcgcattattcgcgcgctgaacgttgacgagaagcagtggccgccgcgc
caggccatgtggtacatcaacggcaaaaaagacgatggcctgcgcccgcagcatattgaa
agctacggcaacccggtcgaggccaccttgctgcgcatttaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggacttcgccgagctgctgctgcgcgcccacgagctgtgg
ctaaacaagccgcaaatcctcaaccactaccgtgaacgcttcactaacattctggtggat
gagtttcaggataccaaccgcatccagtatgcctggatccgcctgctggcgggcgatcgc
gccaatgtgatgatcgtcggcgatgacgatcagtcaatctatggctggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaggacttcccggcggcggagaccattcgccttgag
cagaactaccgctcgaccagcaatatcctgaaggccgccaacacgctgatcgccaacaac
gacggccgcatggggaaaaacctgtggaccgacggggccgagggcgaaccgatctccatc
tattgcgccttcaacgagctggatgaggcgcgctttgtggttaaccggattaaaacctgg
caagacaacggcggggcgctgaataattgcgccattctgtaccgcagcaacgcccagtca
cgcgtactggaagaggcgctgttgcaaagtgcgatgccgtaccgtatttacggcggcatg
cgcttcttcgaacgccaggaaatcaaagacgcgctggcctacctgcgcctgatcgccaac
cgcaacgacgatgcggcgtttgagcgcgtggtcaacacgccgacgcgcggcatcggcgat
cgcacgctggatgtggtgcgccaggcggcccgcgatcggcaactgacgctgtggcaggct
acccgtgcgctgctgcaggataaggcgttggcggggcgcgcggcgtcctcgttgcagcgc
tttgtcgaactggtggacgcgctggcgtatgaaaccgccgaaatgccgctgcatgtgcag
accgaccgggtgatccgcgattccggcctgtttgtgatgtatgaacaggaaaagggcgaa
aaaggccaggcgcgtatcgaaaacctggaagagctggtaacggcgacgcgccagtacagc
taccaggatgaagatcaggatctgttgccgctgcaggcctttttgtcccatgccgcgctg
gaagcgggggaagggcaggccgatgcctatcaggacgcggtgcaactgatgacgctgcac
tcggcaaaagggctggaatttacccaggtgttcatcgtcggcatggaagaaggcatgttc
cccagccagatgtcgctggatgagggcgggcgtctggaggaagagcgccggctggcctac
gttggcctgacgcgggcgatgcagaaattaacgctgacctatgcggaaactcgccggctg
tacggtaaggaagcctatcaccgcccttcgcgctttatcggcgaactgccggaagagtgc
gtcgaggaagttcgcctgcgcgccagcgtctcacgcccggtgagccaccgccgcatgggg
acgccgatcagcgaaaacgacagcggctataagctcggccagcgtgtgcgccacccgaaa
ttcggcgaaggcaccatcgttaatctggaaggcagcggcgaacactgccggttgcagatc
gccttccagggggaagggatcaaatggctggtggcggcctacgccaagctggaaacccag
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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