KEGG   Gibbsiella quercinecans: AWC35_11625
Entry
AWC35_11625       CDS       T05060                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu03030  DNA replication
gqu03410  Base excision repair
gqu03420  Nucleotide excision repair
gqu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWC35_11625
   03410 Base excision repair
    AWC35_11625
   03420 Nucleotide excision repair
    AWC35_11625
   03440 Homologous recombination
    AWC35_11625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gqu03032]
    AWC35_11625
   03400 DNA repair and recombination proteins [BR:gqu03400]
    AWC35_11625
Enzymes [BR:gqu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWC35_11625
DNA replication proteins [BR:gqu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AWC35_11625
DNA repair and recombination proteins [BR:gqu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     AWC35_11625
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AWC35_11625
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc HHH HHH_5 DUF2529
Other DBs
NCBI-ProteinID: ATA19929
UniProt: A0A250B154
Position
2567609..2570398
AA seq 929 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQFTPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVPGVEADDVIGT
LAQEAEQAGHAVLISTGDKDMAQLVTPNITLINTMNNTVLGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGIGEKTAQALLQGLGGLDTLYANLGDIAGLSFRGAKTMAAKLEQNK
ELAYLSYKLATIKTDVELELSCAQLEVAQMDVDQLHQLFKRYEFKRWLADVESGSWLESK
KGAAKAASKPQAASVAADDAPKAQLSQEGYVTILDDETFNAWIEKLKKAEVFAFDTETDS
LDTLSANLIGLSFAIAPGEAAYLPVAHDYLDAPPQLDRAYVLETLKPLLEDKDALKVGQN
LKFDKSLLARYDIDLRGIAYDTMLESYVLDSVSGRHDMDSLANRYLGHKTITFEEIAGKG
KNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPTLKDSPDLLTVFNEIEMPLLPVLSHI
ERTGVLIDQNILAAHSKELTKRLAELEMQAHELAEEPFNLASTKQLQAILYEKQKLPVLK
KTPGGAPSTNEEVLAELALDYPLPKVLLEYRGLAKLKTTYTDKLPLMINPVSGRVHTSYH
QAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPAGYRIVAADYSQIELRIMAHLSQD
EGLLKAFAAGKDIHRATAAEVFGLPLDKVTNEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RGEAQRYMDLYFERYPGVLKYMERTRQQASEQGYVSTLDGRRLYLPDIRASNAMRRKGAE
RAAINAPMQGTAADIIKRAMIAVDAWLQDQDKPLVRMIMQVHDELVFEVHESAIEAASQQ
IRALMEGSMQLAVPLKVDVGVGKNWDEAH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggcacagattgcagaaaacccgttgatcctggttgatggttcctcttacctctaccgg
gcataccatgctttccctccgctgaccaactcggccggtgaaccgacaggggctatgtat
ggcgtattgaatatgctgcgtagcctgcttttgcagtttactcctagccatgtggccgtg
gtatttgatgccaaaggtaaaaccttccgtgatgagctgtttgctgaatataaatcgcac
cggccgccaatgccggacgatctgcgtgcgcaaatagagccgttgcatcagatggtcaag
gccatgggcctgccgttactggtggttcccggtgtggaagccgatgatgtcatcggcacg
ctggcccaggaggccgagcaagctggccacgcggtgctgatcagcaccggtgataaagat
atggcgcagttggttacgccaaacatcactttgatcaacaccatgaacaatacggtgctg
gggccgcaggaagtgtgcgacaagtacggcatcccacctgagctgattatcgatttcctg
gcgctgatgggggattcatccgataacatccccggtgtgcccggcattggcgagaaaacc
gcgcaggccttgttacaaggccttggcgggctggacaccctgtatgccaatctgggggat
atcgccggcctcagcttccgcggtgccaaaaccatggccgctaagctggagcaaaacaaa
gagctggcatacctttcttataaactggcgacgatcaaaaccgacgttgagctggaatta
agctgtgcgcagcttgaagttgcccagatggatgtcgatcagctccatcagttgttcaaa
cgctatgaattcaagcgctggttggccgacgttgaatccggttcctggctggaaagcaaa
aaaggggccgctaaggccgccagtaagccgcaggcggccagcgtggctgccgatgatgca
cctaaggcccagctatcgcaggaaggctatgtcaccatcctggatgacgagactttcaat
gcctggatcgaaaagctgaaaaaagccgaggtgtttgccttcgatacggaaaccgacagc
ctggatactttgagcgcgaacctgatcgggctgtcgtttgccatcgcgcccggcgaagcc
gcctatctgccggtggctcatgattacctggacgcgccgccacagttggatcgtgcctac
gtgctggaaacgctcaagccgctgctggaagacaaagacgcgttgaaagtggggcagaac
ctgaagttcgataaaagcctgctggcgcgttatgacatcgatctgcgcggcatcgcctat
gacaccatgctcgaatcttacgtgctcgacagcgtgagtggccgccacgatatggacagc
cttgccaatcgttatctgggccacaaaaccatcacctttgaagaaattgccggcaagggc
aaaaaccaactgacgtttaatcagattgccctggaacaggccgcgccttatgcggcagaa
gacgcagatgtgacgctgcagttgcacctggccatgtggccaaccttgaaagacagccca
gatctgctcacggtattcaatgaaattgaaatgccgctgctgccggtgctgtcgcatatt
gagcgcaccggggtgctgatcgatcagaacatcctggcggcacattccaaagagctgacc
aaacgattggcagagttggaaatgcaagcccatgagttggcggaagagccgttcaacctg
gcgtcgaccaaacagctgcaagcgattctgtatgaaaaacagaagctgccggtgctgaag
aaaaccccgggcggcgccccttcgaccaacgaagaagtgctggccgagctggcgctggat
tacccgctaccgaaagtgctcctggagtaccgcggcctggcgaagctgaaaaccacctat
accgataagctgccgctgatgattaacccggtcagcgggcgggtgcatacctcttatcac
caggcggtgacggcgaccgggcgcctttcttccagcgatccgaacctgcagaacatcccg
gtgcgcaatgatgaaggccgccgtattcgccaggcgtttatcgccccggctggctatcgt
atcgttgcggcggactattcgcagattgagttgcggatcatggcgcatctgtcgcaagac
gaaggcttgcttaaggcgtttgccgccggcaaagatatccaccgtgcgaccgccgccgaa
gttttcggcctgccgctggataaagtcacgaatgaacagcgccgcagcgccaaggcgatc
aacttcggcctgatttacggcatgagcgcctttgggctttcgcgccagctcaatatcccg
cgcggtgaagcacagcggtatatggatctgtatttcgaacgctaccctggcgtgctgaaa
tacatggagcgtacccgccagcaggcgtctgagcagggctatgtcagcacgctggacggc
cgccggctgtacctaccggatatccgcgccagcaacgccatgcgccgtaagggcgctgag
cgggcagcgatcaatgcgcctatgcagggcactgcggctgatatcatcaagcgcgcgatg
attgcggtggacgcctggctgcaagatcaggacaagccgttggtacgcatgatcatgcag
gtgcacgatgagctggtgttcgaagtgcacgagtcggccattgaggccgccagccagcag
atccgcgcgttgatggaaggcagcatgcagttggccgtgccgctgaaggtggacgtcggt
gtgggcaagaactgggatgaagcgcactaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (31)   

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