KEGG   Gibbsiella quercinecans: AWC35_16635
Entry
AWC35_16635       CDS       T05060                                 
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gqu  Gibbsiella quercinecans
Pathway
gqu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gqu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AWC35_16635 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gqu03400]
    AWC35_16635 (recD)
Enzymes [BR:gqu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AWC35_16635 (recD)
DNA repair and recombination proteins [BR:gqu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AWC35_16635 (recD)
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 Helicase_RecD AAA_11 AAA_22 SH3_13 UvrD-helicase SLFN-g3_helicase PhoH AAA_16 nSTAND3 CbiA AAA_28 UvrD_C T2SSE ATPase SRP54 Flavi_DEAD TrwB_AAD_bind AAA DO-GTPase1 NTPase_1 ResIII MukB
Other DBs
NCBI-ProteinID: ATA20836
UniProt: A0A250B439
Position
3698774..3700630
AA seq 618 aa
MIDLLEQAVELGALRPLDVQFARVVAGEDEPDRLLAAACLSAEAGAGHVCLALDQLQPAL
LFEGRFPALAQALWAAAGQPGAEGWQQSLGAWAAVSDGSQATPLVLQRQRLYLQRMWQSE
GEVAAFIGSESVPAAVDEQRLRDILDHLFGPAAGEPDWQKIAAAVAATRRIAVISGGPGT
GKTTTVAKLLAALVQLAGEARLRIQLAAPTGKAAARLTESLGRASRKLALTPAQQALFPQ
EAATLHRLLGAQPNSQRMRYHRGNPLHLDVLVVDEASMVDLPMMARLIAALPAHARVIFL
GDRDQLASVEAGAVLGDICRFTEQGYSTARASQLARLTGYVVPGQDNAGSAAVRDSLCLL
RKSYRFDAGSGIGQLAFAVNAGDGKAALAALDGRFGDLHGYPLAETADYQALLAACVAGY
RDYLAQMAAGADAGQTLEAFGRFQVLCALREGPFGVVGLNERIEAGLQRAGAINRPSGSL
GRWYPGRPIMIGRNDSTLGLFNGDIGIALSEPGSSELRVHFPLPDGSIKSVQPSRLPAHE
TAYAMTVHKSQGSEFDHTLLVLPNHMLPVLTRELVYTAITRARSQLSLYAVDKVLLSAIN
TPTQRRSGLAERLLPAEG
NT seq 1857 nt   +upstreamnt  +downstreamnt
atgatcgatctgctggaacaggcggtggaactgggggcactgcgcccgttggacgtgcag
tttgcccgcgttgtggcgggggaagatgaaccggatcgcctgctggccgctgcttgcctg
agcgcagaggccggtgccggccatgtttgcctggcgctggatcagttgcagccggcgctg
ttgtttgaagggcgtttccctgcgctggcgcaggctttgtgggcggcggctgggcagccg
ggggctgaaggctggcagcaaagcctgggcgcctgggctgcggtcagcgacggcagccag
gccacgccgctggtgttgcagcgccagcgcctgtatttgcagcgcatgtggcagagcgaa
ggcgaggtggcggcgtttatcggcagcgaaagcgtgccggcggcggtggatgaacagcgc
ctgcgtgacattctcgatcatctgtttggccccgccgctggggagccggattggcagaag
atcgccgcggcggtggccgccacgcgccggatcgcggtgatatccggcgggccgggcacc
ggcaaaaccaccaccgtcgctaaactgctggcggcgctggtgcagttggccggcgaggcg
cgcttgcgcattcaactggctgcgccgaccggtaaagcggctgcgcggttaactgaatcg
ctgggccgggccagccgcaagctggctctgacgccggcgcagcaggcgctgttcccgcag
gaggccgccaccttgcaccgtttactgggcgcgcagccgaacagccagcggatgcgttac
caccgcggcaatccgctgcacctggacgtgctggtggtggatgaagcctcaatggtggat
ttgccgatgatggcgcgcctgatcgccgccttgcccgcccatgcgcgggtgatttttctt
ggcgatcgcgatcagttggcgtcggtggaggcgggggcggtgttgggcgatatttgccgc
tttaccgaacagggctacagcacggcgcgggcgagccaactggcccggttgaccggttac
gtggtacctgggcaggataacgcaggcagcgcggcggtgcgcgatagcctgtgcctgctg
cgcaaaagttaccgctttgatgccggttcgggtattgggcaactggcgtttgccgtcaac
gccggcgacggcaaagcggcattggcggcgctggatggccgctttggcgatcttcacggc
tatccgctggcggaaaccgccgattatcaggcgctgttggccgcctgcgtggcgggctac
cgtgactacctggcgcagatggccgccggggcggatgccgggcaaaccctggaagccttc
ggccgttttcaagtgttgtgtgcattgcgtgaagggccgtttggcgttgtggggttaaat
gagcggattgaagccgggctgcagcgtgcgggggcgattaaccggcccagcggcagccta
gggcgttggtacccgggccgcccgatcatgattggccgcaacgacagcacgctggggttg
tttaacggtgatatcggcattgcgttgtcagaaccgggcagtagcgagctgcgcgtgcac
ttcccactgccggacggcagtatcaaatcggtgcagccaagccgcctgccggcgcatgaa
acagcctacgcgatgacggtgcataaatcgcaaggctcggagtttgatcacacgttgttg
gtgttgccgaaccatatgctgccggtattaacgcgcgagctggtgtataccgccatcacg
cgcgcgcgcagccagctttctctctatgcggtggacaaggttttgctgagcgccatcaat
acgccgacccagcgccgcagcggattggccgagcgcctgctgccggcggaagggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (48)   

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