KEGG   Gossypium raimondii: 105768821
Entry
105768821         CDS       T04129                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46 isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105768821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105768821
   03009 Ribosome biogenesis [BR:gra03009]
    105768821
Enzymes [BR:gra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     105768821
Spliceosome [BR:gra03041]
 Complex A
  U1 snRNP components
   U1 related factors
    105768821
 Complex B
    105768821
Ribosome biogenesis [BR:gra03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    105768821
SSDB
Motif
Pfam: DEAD Helicase_C ResIII WW ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 105768821
NCBI-ProteinID: XP_012444483
UniProt: A0A0D2PX89
Position
7:complement(1611045..1616225)
AA seq 655 aa
MASTATASSAGPRYAAPDPTLPKPWKGLVDGKTGYLYFWNPVTNVTQYERPTSADSVPKP
SVAPISSSVQVQQSSEGRCGYSPGKENDRDGRGSEAKLEPVSRTDQNARSGPVHSHNTPN
VTSSSVSGVSSARGHGSVTGGSNLSGDAYRRQHEITVTGDEVPPPFSSFESTGFPSELLR
EVHNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLVPGFMHIKRCGNDSQMGP
TVLVLSPTRELATQIQDEAQKFGGSSRITCTCLYGGAPKGPQLREIERGVDIVVATPGRL
NDILEMRRVSLQQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPREVRK
IAADLLVNPVQVNIGNIDELVANKSITQNVEVLAPMVKHRRLEQILRSQEPGSKIIVFCS
TKKMCDQLARNLSQFGAASIHGDKSQADRDYVLGQFRSGRSPVLVATDVAARGLDIKDIR
VVINYDFPTGVEDYVHRIGRTGRAGATGLAFTFFGDQDSKHASDLIKVLEGANQQVPAEL
REMASRGGGMGRPRRWAPSSGGYDGERGGRTDSGYGGRDGGRGGRGISTSSSWHEKSGGR
GYGHESSDRNDCGFHDSYDTGRSRSRSPDRFNSASGRDHSPVLSFHELMMKRNQQ
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggcttccactgcaactgcctcttctgctggtcctcgttatgctgcgccagaccccacc
ctacccaaaccatggaaaggcctagttgatggtaaaactggttatctatacttttggaat
cctgtaacaaatgtcacgcagtatgagaggcctacaagtgcagattctgtcccgaaacct
tctgttgcacctataagttcttcagttcaagttcagcaatcttctgaaggacgttgtggt
tatagtcctggcaaagaaaatgaccgggatggaagaggaagtgaagccaaacttgagcca
gtatcaaggactgaccagaatgctagaagtggaccagttcattcccataatacgcctaat
gtgacttccagctctgtgtcgggagtatcttctgctagaggacatggatcagtgactggg
ggaagtaatttgtctggtgatgcttatcgccgtcagcatgagataacagtaactggagat
gaggtgcccccacctttttcatcatttgaatctactggatttccttctgagttacttaga
gaggtacacaatgctgggttttctgctccaactccaattcaggctcaatcatggccaatt
gcattgcaaggtagagacatagtggccattgcaaaaaccggttctgggaaaacattgggt
tacctagtacctgggtttatgcatatcaagcggtgcggtaatgattctcaaatgggtcca
actgtgttagtattatcaccaacaagggagctggctactcagatacaagatgaagctcag
aagtttggtggttcatcaagaattacgtgcacatgtctgtatgggggagcaccaaaaggt
cctcagttgagagaaattgagagaggagtagatattgtggttgccactcctggccggtta
aatgatattctagagatgaggagagtcagcctccagcaagtttcttacctcgtgttagat
gaggctgatcgcatgttagatatgggttttgaacctcagattaggaagattgtgaaagag
gtgcctactcgtaggcagactctaatgtacacagcgacatggccaagggaagttcggaaa
attgcagcagatctactggtaaatcctgttcaggtcaacattggcaatatcgatgagctt
gtggcaaacaagtctattacacagaatgtcgaagtattagcaccaatggtaaaacacaga
agacttgagcagattctgcgctctcaagaaccaggatccaagattatagtcttttgttca
accaagaagatgtgtgatcaacttgctcgcaacctcagtcagtttggagctgcttctatc
catggtgacaaatctcaggctgacagggactacgtgcttggtcagtttcgctctgggagg
tcgccagtgcttgttgctactgatgttgctgctcggggcctagacattaaggacatcagg
gtggtaatcaactatgacttccctactggagttgaggattatgttcataggattggaagg
actggaagggcaggtgcaactggattggcttttacattctttggtgatcaggattcgaag
catgcttcagatctcatcaaagttttagaaggagcaaaccagcaggtgcctgcagaactt
cgtgaaatggcttcacgtggtggtgggatgggaaggcctagacgatgggctcctagttct
ggtggctatgatggtgaacgtggcggacgcactgattcagggtatggtggtagggatggt
ggaagagggggtcgaggaatttctacatcctcgagctggcatgagaaaagtggtggacgt
ggatatggtcacgagtcttctgacaggaatgattgtggtttccatgatagttatgatacg
ggacgcagtcggagtcggagtcctgacaggtttaatagtgcttctggacgtgatcattcc
ccagtgctcagtttccacgagctgatgatgaaacgtaatcagcagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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