KEGG   Gossypium raimondii: 105777932
Entry
105777932         CDS       T04129                                 
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
gra  Gossypium raimondii
Pathway
gra04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105777932
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gra01002]
    105777932
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gra04131]
    105777932
   04121 Ubiquitin system [BR:gra04121]
    105777932
Enzymes [BR:gra01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     105777932
Peptidases and inhibitors [BR:gra01002]
 Metallo peptidases
  Family M67
   105777932
Membrane trafficking [BR:gra04131]
 Endosome - Lysosome transport
  Others
   Others
    105777932
Ubiquitin system [BR:gra04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    105777932
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 105777932
NCBI-ProteinID: XP_012456913
UniProt: A0A0D2UVU3
Position
10:46549202..46554311
AA seq 507 aa
MKLDVNAMARRVEVDNRIPLRYYYRIADSLLKQANIYREEKNIVDLYIILLRYSSLVSET
IPFHRDYQVLLPKEKAVYRKRLLAVLDELESLKPEVQQRVEELNKAHTGARLVDLDDHEG
PFHGSDKMSPSDWNPENRRLNMSLDIKQPANMEVQSSWKYNDNHNQIDRQFQKLSLNKPL
PNKETLSRHSFLGPNGFHGQWLGPSAEIKVQYPSNKDLAPAENSSLNQAEQYGPLAVKDG
EPGGVGSAMDSVLSLDDGRWLHPAEESCTSLTSEANQDLFQFVGMKQPSPPPVIAQVQPE
FTPIHPSKVADPRPGPAKSSQDGLPNSSSFQHLHVPVQMMEDFLRLARANTEKNLETCGV
LAGSLKNRVFHITALIIPKQESTSDSCSTLNEEEIFEVQDKLSLFPLGWIHTHPTQTCFM
SSVDLHTHYSYQIMLPEAIAIVMAPTDTSSPHGIFHLSDPGGVSIIRNCQQRGFHPHEEP
SDGTPIYEHCSHVFMNPKIKFDVVDLR
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgaagcttgacgtcaatgcgatggctcgtagagtcgaagtcgataatcgaattccactc
cggtattattatcgaatcgccgatagtctcctcaagcaggcgaacatttatcgtgaggaa
aaaaatatagtagatttgtacataattctacttagatattcaagtttggtatcagaaaca
ataccattccatcgagattaccaggttttgcttccgaaagaaaaggcggtgtataggaag
agacttttagctgtactcgatgagcttgagtctctaaaaccagaggttcaacagagagtt
gaagaactaaataaagctcatacaggggctcgattggttgaccttgatgaccatgaaggc
cctttccatggctcagataagatgtcaccttcggattggaaccctgaaaatagacggttg
aatatgagcttggatattaaacagcctgccaacatggaagttcaatcttcatggaagtat
aacgataaccataatcagattgacaggcagtttcagaagttgtctcttaataaacctctt
ccaaataaagaaactctgtctagacactcgtttctaggccctaacggctttcatggccag
tggctcggaccaagtgcagagataaaggttcaatatcctagcaataaggacttggcacct
gctgaaaattcaagcctgaatcaggctgaacaatatggtcctttggctgtaaaagatggt
gaaccaggaggggttggttctgctatggactcggtactctcgttggatgatggtcgatgg
ttacatcctgctgaagagtcatgtacttctttgactagtgaagcaaaccaggatcttttc
cagtttgttggtatgaaacaaccttctcctcctcctgttattgctcaagtacagccagaa
tttacaccaattcatccatcaaaagttgctgatccaagacctggtcctgcaaagtcttct
caagatggattgccaaactctagttcatttcaacatttacatgttccagtacaaatgatg
gaggatttcttacgactggctcgggccaatacagaaaagaacttggaaacatgtggtgtc
ttagctggatcattgaaaaacagggttttccacatcactgcacttataattccaaagcag
gagtcaacttcagattcgtgttcaacattaaatgaagaagagatttttgaagttcaagat
aaattatctctttttcctctgggatggattcatacgcacccaactcagacttgtttcatg
tcatcagttgatcttcacacacattactcgtaccagattatgctaccggaagcaattgca
attgttatggccccaactgacacgtccagcccacatggtatctttcatctgtctgatcct
ggtggtgtgtctatcatccgtaactgccagcaacgagggttccatccccatgaggagcct
tcggatggaaccccaatctatgagcattgctctcatgtgtttatgaatcccaagataaag
tttgatgttgttgatctccggtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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