KEGG   Gossypium raimondii: 105794811
Entry
105794811         CDS       T04129                                 
Name
(RefSeq) uncharacterized protein LOC105794811 isoform X1
  KO
K11797  PH-interacting protein
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105794811
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     105794811
SSDB
Motif
Pfam: WD40 NBCH_WD40 Bromodomain
Other DBs
NCBI-GeneID: 105794811
NCBI-ProteinID: XP_012479606
UniProt: A0A0D2N9L3
Position
7:33814778..33828296
AA seq 1690 aa
MDWKCSSSAAASSLCKAPLNVSTAMPEKALVETTVDIDLREIYFLIMQFLSAGPCQRTFA
QFSKELLEHQLLPRRYHAWFSRSGEHSGNDDDDGISFPLSYNNLVERYPHIEQDHLVKLL
KQLICTLCSKSVGDAHPPNAADVPTLLGSGSFSLLNSDKSMRNRQGKPMPAYLRWPHMQA
DQVRGLSIREIGGGFRKHHRAPSIRSACYAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFD
RSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNVLVASASNDFVIRVW
RLPDGLPVSVLRGHTAAVTAIAFNPRPAFAFQLLSSSDDGTCRIWEARYSHCSPRIYLPK
PSEAATGSGNFPFNNGPSSSNVPQTHQILCCAFNVNGTVFVTGSSDTFARVWSACKPSTD
DTQQPVHELDVLAGHENDVNYVQFSGCAVPSRSSMSDIIKEDNLPKFKNSWFCQDNIVTC
SRDGSAIIWIPRSRRFHGKAGRWTKAYHLKVPPPPLPPQPPRGGPRQRVLPTPRGVNMIV
WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHIASSYVLDVHPFNPRIAMSAGYDGKT
IVWDIWEGIPIRIYEIGRFKLVDGKFSPDGTSIVLADEVGQIHLLNTGQGESQKDAKYDQ
FFLGDYRPLIWDSAGNALDQETQSTPHRRNMQDLICDASMIPYPEPYQSMYQKRRLGALG
IEWHPSSTKLAIGPDISLGQDFEMPLLEDLERVMEPLPDFMDAMYWEPENEVISDDTDSE
YNVAEECSTEGEQGALCSSSSRGTESSEADSEVECSHKDGLRRSRRRKCSPESELKTSSG
RRVKKRYLDERDGTIPKTSRTKKSKSGRKASKRKSSKGKTLRPQRTAARNARSMMSRITG
TSTDGDDEVDSEGDSSNSESLSQDSSTSNSETERHLENVKLKSMKKEQESEGIVWSHELL
KSQSDTVNRKRLVLKFSLRDSRKPGASEATRLNTGNQINIPDPSSGPSGAFDENKNDRTK
DPGSTTADVELSEHDRIDLEDTRQSLNTEDHLENFVGEKDNKIRWGEVKIRTSKRSRSGD
LLPSDVPNGNRITAVNREEGELTTPTLQDLDGGMMEEFAPDEVHKSLLSLGDHQLNGSAS
ASYSNISLNQGDMDQSSCDKYGNHDSLQTNQVKQSHESNEITPLKLVKLRIRTKAISGDL
GSPSKQKSLTVVNGPTCNERDVRPRNTLPAEQNQSYSRQEMGEGSDRSSSLQLLHSGLKL
NMYDGENPYKDTTDSEGLNVINDHDSEIMFTEAAADAVHRRQSMKMKATSLEQNPWNHNL
RVRVDHALAGTSENEEKTSLKTYNGIASEQWMSSSKHRDRSRSSRTKRGSGHDNDLKFSS
GRKSNPSVRKLSWLMVSEQEEGYRYIPQLGDEVVYFRQGHQECIEEGFMKGTGPWSSRGH
LSAVEICRVVDLAYSHVPGSGESCCKITLRFTDNSSCAFGEVFILTLPELIGLPDFLVEK
TRYDAAMSREWTRRDKCLVWWKNHDEEGGSWWDGRIITSQPKSMDFPDSPWEKYEVIYKD
GCKYRHSAWELHDPNFTWEHPHIGSEIRDRLLSAFGKLERSVVRDQDFYGFQKLNEAAQK
SEFLNRFPVPLYPDFIRLRLENNYYRTLEGVKHDIKIMLSNAESYFARSAHLSSKMRRLS
DWFTKTLSRL
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggactggaagtgttcatcttctgctgctgcgtcttctctttgcaaggcgcctttaaat
gtctcgactgcaatgccggagaaggctctggttgagactactgttgatattgatcttcga
gaaatttacttcttgataatgcaattcctgtctgctggtccttgccagagaacttttgca
cagttctcaaaggaacttttggaacaccagcttctaccaagaagatatcatgcttggttt
tcaagaagtggtgaacatagtgggaacgatgatgatgatggcatctcattcccattaagt
tataacaacttagttgagaggtatcctcatattgagcaggatcacttggtaaagcttctg
aagcaactaatctgtactctgtgcagcaaatctgtaggagatgcccatcctccaaatgct
gctgatgtccctacgctattgggatctggttccttttcacttttgaattctgacaagagt
atgaggaataggcaaggtaagcctatgcctgcctatcttcgttggcctcatatgcaagct
gatcaagttcgagggttaagtataagagaaattgggggaggtttccggaagcaccaccga
gctccctctattcggtctgcatgctatgctattgctaaaccatctacgatggtgcaaaag
atgcagaacataaagaagttgagagggcaccggaatgctgtctattgtgccatatttgat
cgctctgggagatatgtcattactggttccgatgatcgccttgtcaaaatttggtctatg
gaaactgcattttgcttggccagctgccgtggacatgagggtgacataactgacctggct
gttagttcaaacaatgttttggttgcatccgcttcaaatgattttgtgattcgagtttgg
cgcttgccagatgggttacctgtttcagttctacgagggcatacggcagctgttactgcc
attgcatttaatcccaggcctgcctttgctttccagcttttatcgtcatctgatgatggg
acttgccgaatctgggaggccagatattcacattgtagcccacgcatatacctgccgaag
ccttctgaagctgccactgggagtggcaattttccatttaataatggaccttcctcaagt
aatgttccacaaacccatcaaatattatgttgtgcatttaacgtcaatgggacagttttt
gtcactggtagctctgacacttttgccagggtgtggagtgcctgtaagcctagtacagat
gatacacaacaaccagttcatgagctggatgttttggctggccatgaaaatgatgttaat
tacgttcaatttagtggatgtgctgtaccttctagatcctcaatgtctgatatcataaag
gaggacaatcttccaaaatttaaaaattcctggttctgtcaggacaacattgttacctgt
tctcgtgatggtagtgcaataatctggatacccagatcacgtagatttcatggaaaagca
ggacgttggacaaaggcatatcatctgaaggttccacctcccccgctacctcctcaacct
cctcgaggtggtccacgtcagagagttctccctactcctcgtggtgtcaatatgattgtg
tggagcctggataatcgttttgttctagcagctataatggattgcagaatatgcgtgtgg
aatgctgttgatggtagtttggtacattctttgactggtcacattgcatcgtcttatgtt
ttggatgttcatcctttcaatcctcgaattgcaatgagtgctggatatgatggaaaaaca
atagtttgggatatatgggagggcatacccatccggatatatgaaattgggcgttttaag
ttggttgatgggaagttttctccggatggaacgtcaattgtacttgcagatgaagttggc
cagatacatttgcttaacactggccagggtgaatctcaaaaggatgccaagtatgatcag
ttctttcttggagactatcgcccccttatttgggattctgctggaaatgctcttgatcag
gagacacagtctacgccgcatcgtaggaatatgcaagatcttatttgtgatgccagcatg
attccatacccagaaccttatcagagtatgtaccagaaacggcgacttggtgcgctgggt
attgagtggcatccatcctccacaaagttggctattggtccagatatcagtttaggccag
gattttgaaatgccactcttagaagatctggaaagagtgatggaaccactacctgatttc
atggatgccatgtattgggaacctgaaaacgaagttatcagtgatgacactgattcggag
tacaatgttgctgaggaatgttctacagaaggtgaacagggggcattgtgttccagctct
tctagaggcacagagagcagtgaagcagacagtgaggttgaatgcagtcacaaagatggc
cttcgcagatcacgaagaagaaaatgcagccctgaatctgagttgaagacttcatcaggg
aggcgagtcaaaaagagatatttggatgagcgtgatggaactatacccaaaaccagtaga
actaaaaaatcaaaaagtggcagaaaagcttcaaagagaaagtcttccaagggaaagaca
ttgagacctcagagaactgctgcacgtaatgctcgaagcatgatgtctagaatcactggg
acatctacagatggagatgatgaagtggactcagaaggtgattcatcaaatagtgagtca
ttgtctcaggattcaagtacttcaaacagtgaaactgagagacacttggagaatgtaaaa
ctgaagtctatgaagaaggaacaagagtctgagggcatagtatggtctcatgagctcctc
aaatctcaatcagataccgtgaacaggaagagattggtcttaaagttctcgttacgtgat
tctaggaagccaggtgcttcagaggccaccagattgaacactggcaatcagatcaatata
ccagacccttcatctggaccttcaggagcttttgatgagaataaaaatgaccgcaccaaa
gaccctggctcaaccactgcagatgtggagctctctgagcatgacaggattgatctggaa
gatacaaggcaatctttaaatactgaggaccatttagagaactttgtgggggaaaaggat
aacaaaatcagatggggagaggttaaaattcggacatccaagcgttcaaggtcaggagat
ttgttgccaagtgatgtccccaacggaaacaggattactgctgtgaatagggaagaggga
gagttaactactcctacattgcaagatctggatggagggatgatggaagagtttgctcct
gatgaggtgcacaaatctttactgtccctaggtgaccatcaactgaatggtagtgcttca
gcatcttactctaatatcagcctcaaccagggagatatggatcagtctagctgtgataaa
tatggtaatcatgactccttgcaaacaaatcaggttaaacaatctcatgaatcaaacgag
attaccccactcaaattagtgaaattaagaataaggacaaaagcaatttcaggggacctt
ggaagtccttccaaacagaagtccctcactgtagttaatggtccaacatgcaatgaacgt
gacgtgaggcccagaaacactttgcctgcagaacaaaatcaaagttacagcaggcaagaa
atgggtgaaggttcggacagatcaagttctctgcagttgttgcactcaggtttgaagttg
aacatgtatgatggggaaaacccatataaggacacaactgattctgaaggcttaaatgtc
atcaacgatcatgattcagaaattatgtttaccgaagcagcagctgatgcagttcacaga
agacagtccatgaagatgaaggcaacttcactggagcagaatccttggaaccataacttg
agggtaagagtagatcatgcattagcagggacatcagaaaatgaagaaaaaacctctttg
aaaacatataatggtattgcatctgaacaatggatgtcaagttccaaacatagagacaga
tcaagatccagcagaaccaagcggggcagtggccatgacaatgacttaaaattttcaagt
ggaaggaagtcaaatccttctgttagaaaattatcatggttgatggtgtcggaacaggaa
gagggttatcgttatatacctcagctgggcgatgaagttgtatatttcagacaggggcat
caagagtgcattgaagaaggtttcatgaaggggactggtccatggagctcaaggggacac
ctgagtgcggtggaaatttgcagggttgtagaccttgcttattcccacgttccaggttct
ggagagagttgctgtaaaatcacacttagatttactgataattcatcatgtgcatttggc
gaggtatttatattgaccttgcctgagttgataggtcttcctgattttcttgttgagaag
acaagatatgatgctgcaatgagcagagaatggactcgtagggataaatgcctagtatgg
tggaagaaccacgatgaggagggtggaagttggtgggatggtagaatcattacttcacag
cccaaatctatggatttccctgatagtccttgggaaaaatatgaagttatttacaaagat
ggctgtaagtatcgacacagtgcttgggaactgcatgaccctaactttacgtgggagcac
ccacatattggttctgaaatcagggataggctcctgtctgcttttggtaaattagagcgt
tcagtagtcagagatcaggatttttatggattccagaaactgaacgaagctgctcagaag
tcagaattccttaacaggtttccagttccattgtatcccgatttcatccggcttaggtta
gagaacaactattatcgaacgttggaaggagtgaagcatgacataaaaataatgctttca
aatgcggagagttatttcgctagaagtgctcacctatcttcaaagatgaggcgtctatca
gactggtttaccaagacattgtcaaggttgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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