KEGG   Gossypium raimondii: 105797108
Entry
105797108         CDS       T04129                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
gra  Gossypium raimondii
Pathway
gra04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    105797108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105797108
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     105797108
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like F-box F-box_4 LRR_8 RsmF_methylt_CI
Other DBs
NCBI-GeneID: 105797108
NCBI-ProteinID: XP_012482496
UniProt: A0A0D2RHN1
Position
3:complement(10043763..10046894)
AA seq 372 aa
MIGEAKVGNEDLNLCFEKLMMVAAGNSEGVKMNGVGITEWKDIPVELLLRIVSLLDDQTA
IVASSVCSGWRDAICLGLTQLCLSWCRKNMNNLVLSLAPKFTRLQTLILRQENPQLEDNA
VETISKFCHDLQDLDLSKSFKLSDRSLYALAHGCPNLKKLNISGCTSFSDEALAYLTNFC
RKLKILNLCGCVKAATDHALQAIGRNCNMLQSLNLGWCDNVGDLGVMSLAYGCHDLRCLD
LCGCVRITDDSVIALANECLHLRSLGLYYCRNITDRAMYSLAHSRVKNKGLTWESSMKGR
YEDDGLKSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQA
HRTFNTIFHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgattggtgaagcaaaagttgggaatgaagacttgaacttatgctttgagaagctgatg
atggttgcagctgggaatagtgagggagttaagatgaatggtgtggggatcactgagtgg
aaagatatccctgtggagctgctgttgagaatcgtttcactactcgatgatcagaccgct
atcgttgcttccagtgtctgtagtgggtggagggatgccatttgcttgggcctcacacaa
ctctgtctctcatggtgtagaaagaacatgaacaatttggttctatctcttgcacctaaa
ttcaccagattgcaaactctgatattgcgccaagagaatccacagctcgaggacaatgct
gtcgagactatttcaaagttttgtcacgatctgcaggacctggacctcagtaaaagtttc
aagcttagtgatcgctccttgtatgcattggctcacggttgtcctaaccttaaaaagctt
aacatcagcggctgcacatcattcagcgacgaagctctcgcgtatttgactaatttttgt
cgaaaactaaaaatattaaatctgtgcggatgtgttaaagctgcaactgaccatgcactg
caggctattggacgaaactgcaatatgttgcaatctttgaatctgggatggtgtgacaat
gttggcgatctcggagtcatgagtttagcatacggatgccatgatctccgatgcctggac
ctgtgtggttgtgttcgtataacagatgatagcgtgattgctttagcaaatgagtgtctc
catttgaggtcgctcggactgtactattgccgtaacatcacggacagggcgatgtactca
ttggctcacagccgagtgaagaacaaaggtttgacgtgggagtcgtcgatgaaaggtaga
tatgaagatgatggtctaaaaagtctgaatataagccagtgtacggcactgactccatca
gcagttcaggctttatgtgacacattccctgcacttcatacctgctctggaaggcactcc
cttgttatgagtggttgcttgaacttaacctccgtgcattgtgcttgtgcggttcaagct
caccggaccttcaacactattttccacacagctcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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