KEGG   Geobacillus stearothermophilus: GT50_01930
Entry
GT50_01930        CDS       T04043                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
gse  Geobacillus stearothermophilus
Pathway
gse02024  Quorum sensing
gse03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gse00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GT50_01930
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GT50_01930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gse03019]
    GT50_01930
   03036 Chromosome and associated proteins [BR:gse03036]
    GT50_01930
Messenger RNA biogenesis [BR:gse03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GT50_01930
Chromosome and associated proteins [BR:gse03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GT50_01930
SSDB
Motif
Pfam: Hfq LSM DUF5608
Other DBs
NCBI-ProteinID: ALA69070
UniProt: A0A9W3R1K5
Position
complement(362314..362541)
AA seq 75 aa
MKNTINIQDQFLNQLRKEGIQVTVFLLNGFQLRGYIKGFDNFTVLLEVQGKQQLIYKHAI
STFAPERNIHFETEQ
NT seq 228 nt   +upstreamnt  +downstreamnt
atgaaaaatacgatcaatattcaagaccagtttttaaaccagctgcgcaaagagggcatt
caagtgaccgtcttcttattgaacggcttccaactgcgcgggtacattaaagggtttgac
aacttcaccgtacttttggaagtgcaaggaaaacaacagctcatttacaagcacgccatt
tcgacgtttgcgccggagcggaacatccattttgaaaccgaacagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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