KEGG   Geobacter sulfurreducens KN400: KN400_2154
Entry
KN400_2154        CDS       T01940                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
gsk  Geobacter sulfurreducens KN400
Pathway
gsk03030  DNA replication
gsk03430  Mismatch repair
gsk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gsk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KN400_2154 (holA)
   03430 Mismatch repair
    KN400_2154 (holA)
   03440 Homologous recombination
    KN400_2154 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsk03032]
    KN400_2154 (holA)
   03400 DNA repair and recombination proteins [BR:gsk03400]
    KN400_2154 (holA)
Enzymes [BR:gsk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KN400_2154 (holA)
DNA replication proteins [BR:gsk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KN400_2154 (holA)
DNA repair and recombination proteins [BR:gsk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KN400_2154 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delta_C CPSase_L_D3 DNA_pol3_gamma3 DUF222
Other DBs
NCBI-ProteinID: ADI84966
Position
complement(2313303..2314316)
AA seq 337 aa
MKSDELDNAIERGEIAPLYYFYGDEPYLMERAVKRLTERVVSADFRDFNLDVFYGNESKG
DDIATAAQTLPMFADRRMVLVKRAGDLSAAALETLAACVADPAPQTCLLFVGDKIDKRKK
FFLDLAKKGELVEFKRPYENQLGVFIRDEARSLGKRIDGAAVEMLVYLVGNNLGELATQL
EKVATFVGTRETLTVEDVREVVSDTKVESVFDLANALGERDLGKSLRSLATILRDGEAPL
MLLAMIARHFRQLWRVRELMAAKVQQQEVARRTGINPYFLKGVMDQARNFTVADLRRVFE
GLYAADLALKGVGGGGKPSLVMERLVMDVCGMGRRKR
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaaatccgacgaactggataacgccattgaaaggggggagattgcccccctttactat
ttttacggagacgagccctatctgatggagcgggccgtcaagcgtctcacggaacgggtc
gtgtcggcggatttccgcgatttcaacctggacgtattctacggcaacgagagcaagggg
gatgatatcgccactgccgcccagaccctgcccatgttcgccgaccgccgcatggtgctc
gtcaagcgggccggcgatctgtcggccgctgctctcgaaacccttgccgcctgcgttgcc
gatcccgctccccagacctgtctcctctttgtgggcgacaagatcgacaagcggaagaag
tttttcctggatctggcaaaaaagggagaactggtcgagttcaagcgtccctacgagaac
cagctcggcgtattcatccgtgacgaggcccggagtctcggcaagcggatcgacggcgct
gccgttgaaatgctcgtctatctcgtggggaacaatctgggggaactggcgacccagctg
gaaaaggtggccacctttgtgggtacgagggagacgctcacggtagaggatgtgcgggaa
gtggtatccgataccaaggtggaaagcgttttcgacctggccaacgctctgggagagcgt
gatctgggcaagtctctgcggagcctggccactattttgcgggacggcgaggccccactc
atgcttctggccatgatagcgcggcatttccgccagctctggcgggtgcgcgagctcatg
gccgccaaggtccagcaacaggaggtcgcccgcagaaccggcatcaatccctacttcctc
aagggggtcatggatcaggcccgcaacttcaccgtggcagacctgcgccgggtcttcgag
gggctctatgcagccgatctcgccctcaagggagtcggtggcggcggaaaaccttcgctg
gtcatggaacggctggtgatggacgtgtgcgggatgggacggcggaagaggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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