KEGG   Geobacter sulfurreducens PCA: GSU0898
Entry
GSU0898           CDS       T00155                                 
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
gsu  Geobacter sulfurreducens PCA
Pathway
gsu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSU0898 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsu03019]
    GSU0898 (recQ)
   03400 DNA repair and recombination proteins [BR:gsu03400]
    GSU0898 (recQ)
Enzymes [BR:gsu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GSU0898 (recQ)
Messenger RNA biogenesis [BR:gsu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GSU0898 (recQ)
DNA repair and recombination proteins [BR:gsu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GSU0898 (recQ)
SSDB
Motif
Pfam: RQC HRDC DEAD Helicase_C RecQ_Zn_bind HHH
Other DBs
NCBI-ProteinID: AAR34227
UniProt: Q74ER2
Position
963029..964840
AA seq 603 aa
MGHETLAVLRTVFGYRSFRPFQEEIVDRVARGGDTFVLMPTGGGKSLCYQIPSLVRPGVG
IVISPLISLMKDQVDALRENGVAAACYNSTLGERESRRVLARLHGGELDLLYVAPERLMT
DAFLERLREIPIALFAIDEAHCVSQWGHDFRPEYVELGRLRGLFPTVPMIALTATADAQT
RGDIVTRLGLRDAEMFVTGFDRPNIRYSVLEKQKPFRQLEEFLATRPREAGIVYCLSRKR
VEEVAEKLRAAGVEAGAYHAGLADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFV
VHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKL
NAMVGFAEALVCRRRALLGYFGERLEEPCGNCDLCLAPPETFDATEEARKALSCVYRVGQ
RFGVGHVIDVLRGSRSERILALGHDRLSTYGIGASLAAEAWGSIIRQLIHRGYLEQDLAN
YSVLKLTPAARPLLRGEESLVLAKPRLRMAAPKKEKAPRRPGAATPAERDEELFQELRAL
RKRLADDQQVPPYIIFSDATLAEMASLRPTTPEELLRVNGVGERKLGRYGAPFLEAIRSH
GAG
NT seq 1812 nt   +upstreamnt  +downstreamnt
gtggggcacgaaaccctcgccgtcctccgcacggtcttcgggtaccggtccttccgcccg
ttccaggaggagatcgttgaccgggtggcgcgcgggggcgatacgttcgtcctgatgccc
accggcggcggcaagtccctctgttaccagataccctccctggtacggcccggcgtgggg
atcgtgatttcccccctcatttccctcatgaaggaccaggtggatgccctgcgcgagaac
ggcgtggcagcggcctgctacaactcgaccctgggcgagcgggagtcgcgccgggtgctc
gcccggctccacggcggcgagctggaccttctctacgtggccccggaacggctcatgacc
gatgcctttctggagcggctacgggagatacccatcgcgctcttcgccattgatgaggcc
cactgcgtctcccagtgggggcacgatttccgtcctgagtacgtggagctgggacggttg
cgggggctgttcccgaccgtgccgatgatcgccctgaccgccaccgccgacgcccagacc
cgaggcgacatcgtgacgcggctggggcttcgggacgccgagatgttcgtgaccggcttc
gaccggcccaatatccgctacagcgttctggaaaagcagaagccgttccgacaactggag
gagttcctggcgacgcgcccccgggaggcgggcattgtctactgcctttcccgcaagcgg
gtggaagaagtggcggagaagctccgggcggccggggtggaggcgggggcctatcacgcc
gggcttgccgacgcggaacggagccgggtccaggaggcgttcctgcgggacgacatccgg
gtggtggtggccacggtggccttcggcatggggatcgacaagcccaacgtccggtttgta
gtccactacgacctgcccaagaacatcgagagttactaccaggaaaccgggcgggccggc
cgcgacggtctcccggccgaggcgctgctcctcttcggctacggcgacatcccggtctcc
cgctccctcatcgagtcgggcgggaaccccgagcaggtgcggatcgagctgcacaagctg
aacgcgatggtggggttcgccgaggcactcgtctgccggcgccgggcactgctcggctac
ttcggcgagcggctggaggaaccttgtggcaactgcgacctctgtctggctccgcccgaa
accttcgatgccaccgaagaggcccgcaaggccctttcctgcgtctaccgggtggggcag
cgcttcggcgtggggcacgtgatcgatgtcctgcgcggttcgcggagtgaacgcatcctg
gccctgggccacgaccggctctcgacctacggcatcggcgccagcctggcggccgaggcc
tgggggagcatcatccgccagctcatccaccggggatacctggagcaggacctggccaac
tactcggtgctgaagctgacccctgcggcccggccgctgctgcggggcgaggagagcctg
gtcctggcgaagccgcggctgcggatggccgctccgaaaaaggaaaaggccccccgccgg
ccgggagccgccacgccggcggagcgggacgaggagctcttccaggagctgcgggcgctc
cgcaaacggttggcggatgaccagcaggttcctccgtatatcatcttcagcgatgcgacc
ctggccgagatggcgtcgctgcggccgaccacgccggaagaacttttgcgggtgaacggg
gtgggcgagcggaagctcggccgctacggcgccccgttcctggaggcgatccggagccat
ggcgccggttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system