KEGG   Gloeophyllum trabeum: GLOTRDRAFT_140591
Entry
GLOTRDRAFT_140591 CDS       T03130                                 
Name
(RefSeq) eukaryotic translation initiation factor 4A-like protein
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GLOTRDRAFT_140591
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gtr03019]
    GLOTRDRAFT_140591
   03036 Chromosome and associated proteins [BR:gtr03036]
    GLOTRDRAFT_140591
Enzymes [BR:gtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GLOTRDRAFT_140591
Messenger RNA biogenesis [BR:gtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     GLOTRDRAFT_140591
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     GLOTRDRAFT_140591
Chromosome and associated proteins [BR:gtr03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    GLOTRDRAFT_140591
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 CMS1
Other DBs
NCBI-GeneID: 19304568
NCBI-ProteinID: XP_007869359
JGI: Glotr1_1_140591
UniProt: S7PX46
Position
Unknown
AA seq 509 aa
MAQQSRPSSSASPASSANDWKAGLRPPPKDARPQTEDVTATKGLEFEDMYLRRELLMGIF
EAGFERPSPIQEEAIPVALTKRDVLARAKNGTGKTAAFVIPALQQIDVNKNKIQALLLVP
TRELALQTSQVCKILGKHMGVQVMVTTGGTTLKDDIMRLSETVHVLVGTPGRVLDLTGKN
VADLSECPVFVMDEADKLLSPEFTPVVEQLLSYMPKERQVMLFSATFPLIVKDFKDKHMS
SPYEINLMDELTLRGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKK
ITELGYSCFYSHAKMLQSHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPK
NSETYLHRIGRSGRFGHLGLAINLVTYEDRFNLYKIEQELGTEIQPIPSTIDKRLYVAPG
AAEEQQKEKASTANGQQQPRPQQHQQGPARPPQQAPNQVLYQSGAPPQQQVRPNGTSLGQ
PQHIMQQRAYPGGQVPVPTGYRGGVAVPR
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggcgcaacaatcccgtccatcatcatctgcatcccccgcctcctcagcaaacgactgg
aaagccggcctccgcccgccaccaaaagacgcccgcccccaaaccgaagatgtgacagcc
acgaaagggctcgaattcgaagacatgtacctgcggcgcgagttgctcatgggcatcttc
gaagcgggattcgaacggccctcacccattcaagaagaagccatccctgtcgccctcacc
aaacgcgacgtcctcgcgcgcgcgaagaacgggacgggtaagaccgccgcgttcgtcatc
cccgccctccagcaaatcgacgtcaacaagaacaagatccaggcactcctgcttgtgccc
acgcgagagctggcgctacagacgagccaggtgtgcaagatcctgggaaagcacatgggc
gtgcaggtgatggtgaccactgggggtacgacgctgaaggatgacattatgcggttgtca
gaaaccgtgcacgtgctggttggtacgcctgggcgggtgcttgatttgacggggaagaat
gtggcagacttgagcgaatgtcctgtatttgttatggacgaagccgacaagctgctgtcg
ccggagttcacgcctgtcgtggagcagctgctgtcgtacatgccaaaagagcgccaagtg
atgctcttcagtgcgacgttcccattgattgtcaaggatttcaaggataaacacatgtcg
tctccatatgaaatcaacctaatggacgaattaactctccggggtgtaacccaatattat
gcctttgtcgaggagcggcagaaggttcactgtctcaataccctcttctccaagctccaa
atcaaccaatctattatcttctgtaattccacgaaccgcgtcgagctcctggccaagaag
atcaccgagctgggctactcatgtttctactcgcacgcaaagatgctgcagtcgcaccgc
aaccgcgtcttccacgacttccgcaacggcgtgtgccgcaaccttgtctgctcggacctc
ctcacgcgcggtatcgatatccaggcggtcaacgtcgtcatcaacttcgacttccccaag
aattccgagacgtacctgcacagaatcggtcggtcggggcggttcggccacctgggtctc
gccataaaccttgtgacgtatgaggaccggttcaatctgtataagattgaacaggagctg
ggaacggagattcagcctataccctcgactatcgacaagagactctatgtcgcccctgga
gctgctgaggagcagcagaaggagaaggcgagtactgcgaatgggcagcagcagccgaga
ccacagcaacaccaacagggacctgcaagaccgcctcagcaagcacctaatcaggtcttg
taccagagcggtgcgcctccacaacagcaagtcaggcccaacggaacctcgctgggtcag
ccccagcacataatgcagcagagagcgtaccctggcgggcaggtaccggttcccactggc
taccgtggaggtgtcgcagttcctcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system