KEGG   Guillardia theta: GUITHDRAFT_119246
Entry
GUITHDRAFT_119246 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
gtt  Guillardia theta
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gtt03016]
    GUITHDRAFT_119246
Enzymes [BR:gtt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     GUITHDRAFT_119246
Transfer RNA biogenesis [BR:gtt03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    GUITHDRAFT_119246
 Prokaryotic type
    GUITHDRAFT_119246
SSDB
Motif
Pfam: PseudoU_synth_1 LRR_6
Other DBs
NCBI-GeneID: 17291314
NCBI-ProteinID: XP_005821576
JGI: Guith1_119246
UniProt: L1IE98
Position
Unknown
AA seq 643 aa
MQQMQISDKHRGMTYRLSLKLQFCKNARDIDVISILHALREAVEQQLVDVYRLYLHHLNL
TDAVMPELLSLLIFCEGTITEVHLSHNRITLKGARMLLEQDRETLLKFYPTERGNSYTPL
LVRLEHNEFDLLHLHLPPETFSTDVMPISVGYDGPAFRVPSWPPRTQPDDDCTIDLTPAA
FPPVSSFAAGVGSDYLPGPFPVNRELQANAYNFPSLQDNLCEEHRQEFEDKSYEQYAEYE
QYAEYEEYEEYEDAAYWGEEEREELSSVDGSEVSVPSETSTTGDCTSSRWEFETELLATP
VEFEDTYVKCLVNLSYLGHKFLGIQRNPYGPTVQQCLVEHMVLLGAIEEDRVEEFLIASR
TDKGVHAAQSLVVVTMKKIQCQSPIAAFIAKLNRSMKAKQQQVEVIAMRQIDPGSKLDTQ
LDTMCRTYQYIIPAFALAPLQREVAANSQQLYARMRTARLTAEELEHVQQVLSCFQRKDN
FVAFTDEAKADKYKETTREVSSFKIKELVYNNNIEYAVIEVEGKGFMYHQIRKMIGLSIL
IIQAGLDHRKSIEGVFRGVPLPGKDKVSSFRLAPAEPLFLDHINFKYDKIKSFLENPSIM
YKNDAFKRNTIIPHVYKESIKPILDFIQALEAAPKDNKEGGSR
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgcaacagatgcagatctccgacaagcatcgaggcatgacgtacaggttgagcctcaaa
ctgcaattctgcaaaaatgcgagagacattgatgtgatctcaatccttcatgcgttgcga
gaggctgtcgaacaacaactcgtagacgtttacagactttaccttcaccatctcaatttg
acggatgcagtcatgccagagcttctaagcctgctcatcttctgcgagggaactattacc
gaggtacacctgtcacataaccgcatcacactcaaaggggcaagaatgttgttggaacaa
gacagggagactctcttaaagttctatcccaccgagcgggggaacagctacaccccactg
ctcgttcgcctggagcacaacgaattcgatctacttcaccttcatttgcctcccgagacc
ttcagcaccgacgtcatgccgatctcagttggatatgatggcccagccttccgcgttcct
tcctggcctccacggactcagcctgatgacgattgcaccatagatcttaccccagctgca
ttcccccctgtcagctctttcgccgctggggtcgggtctgactacctgccgggccctttt
cccgtgaatcgagagctgcaagcgaacgcatacaatttcccctcattgcaagacaacttg
tgcgaggagcatcgacaggaattcgaggacaagagctacgagcagtatgcggagtacgag
cagtatgcggagtacgaggagtacgaggagtacgaggacgcagcgtattggggggaggaa
gagagagaggagctgtccagtgtcgatgggtccgaggtcagcgtgccaagcgagacgtct
acgacgggagattgcacctcgtcaagatgggagttcgaaactgaacttcttgccaccccc
gtcgaatttgaggatacctacgtcaagtgtctagtcaacctttcctacctcggacataaa
tttcttgggattcaaaggaacccgtacgggccaacggtgcagcaatgtttggttgagcac
atggtcttgctgggagcgatcgaagaggatcgggtcgaagagtttcttatcgccagtagg
acagacaaaggagtgcacgccgcgcagtctctggttgttgtgaccatgaagaagattcaa
tgtcagagtccaatcgcagcattcatcgcaaagttgaatcgttccatgaaggcgaagcaa
caacaagtcgaagtcatagcgatgcgtcagatcgatccaggctcaaagctcgacacacaa
ttagacactatgtgtcgcacctaccagtacatcatccccgccttcgctctcgcccccctc
cagcgggaggtcgctgccaattcgcaacagctgtatgcgcgaatgaggacagctcgactg
acagcggaggagttggagcacgtgcaacaggtcttgagctgtttccaacgtaaggacaac
ttcgtagccttcacggacgaggcgaaggcagacaaatacaaggagaccacccgagaagtc
tcatcgttcaagatcaaggagcttgtttacaacaacaacattgaatacgcagtcattgaa
gttgagggcaagggcttcatgtatcatcagatccgtaaaatgatcggactatccatcctc
atcattcaggctggtctggaccaccgtaagagcattgaaggagtgttcaggggagtgcca
cttcccggcaaggacaaagtctcctccttccgcctcgctccggccgagcctctcttcctt
gaccatatcaacttcaaatatgacaagattaaatccttcctggagaacccatcaatcatg
tacaagaacgatgctttcaagcgaaataccatcatccctcatgtctacaaggagtctatc
aagccgatcctcgacttcatccaagccttggaggcggcacctaaagacaacaaggaggga
ggatcacggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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