KEGG   Guillardia theta: GUITHDRAFT_96054
Entry
GUITHDRAFT_96054  CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
gtt  Guillardia theta
Pathway
gtt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GUITHDRAFT_96054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtt03041]
    GUITHDRAFT_96054
Enzymes [BR:gtt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GUITHDRAFT_96054
Spliceosome [BR:gtt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    GUITHDRAFT_96054
 Complex C
   U5 SnRNP specific factors
    GUITHDRAFT_96054
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 17298025
NCBI-ProteinID: XP_005828367
JGI: Guith1_96054
UniProt: L1IZ87
Position
Unknown
AA seq 654 aa
MLQRQKMMEQLRRDRDRDGREREREREREREREKAKAENKDDKDAENAETLISQKELEQV
QKRYLGGAKVKKKVVKVTDKFRFAFDWEATEDTSADVNPLYNKKHEAQLLFGRGLRAGID
MREQKKNSTYVENLEAVRAKIAEEDVDAEQAEEYRKHQEEMKMKMKEAYASRAKASLDRN
MALPGKHWMDKKLTDMTERDWRIFREDFQIATRGGKPCNPIRNWEESGLPPEILEAIKEK
KYKIPSPIQMQCIPLGLLNRDVVGIAQTGSGKTAAFVLPMLVYISKQPPITQDTAPEGPL
ALILAPTRELANQIYDEAITFCKFMNIRCFPLVGGGGVKSIEEQGFTVRQGVEILVATPG
RLIDCLERRLVVLNQCNYVVLDEADRMIDMGFEPQVQAILDAMPSSNLKPEDDAAEEGNQ
EFRYRQTFMFSATMPPAIERITRKYLRRPAFVTVGEAGQTASTVEQHFIFCSENQKNARL
LDLLARGKPPIMVFVNARKNCDVLHKELSSRGHRVTLLHGGKSQEGREEALDSFKSGHYD
IMVCTDVAGRGIDISGVEHVVNFDCPKNIEDYTHRIGRTGRAGKSGVATTILTPEDTHIY
YDLKEKLQESNQNVPREILSHPAAQQKPGAVPQKPRQQVQYVDVEAGRRGGPRN
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgcttcaaaggcagaagatgatggagcagctgcgccgtgacagagacagagacggcaga
gaaagagagagagagagggagagggagcgggagcgggagaaggcaaaggcagaaaacaaa
gatgataaagacgccgagaatgcagaaactctgatctcgcagaaggagcttgaacaagtt
cagaagagatatctaggaggagcaaaggtcaagaagaaggtcgtgaaggtgacggacaaa
ttccgtttcgccttcgactgggaggcaacggaagacacttcagctgacgtgaaccctctc
tacaacaagaagcacgaggcgcagcttttgttcggacgcggtttgcgcgctggtattgac
atgcgtgagcaaaagaagaattcgacatacgttgagaacctcgaggcggtgcgagccaag
atcgcagaggaagatgtcgatgctgagcaagcagaggagtacagaaagcatcaagaggag
atgaagatgaagatgaaggaagcgtacgcgtctcgtgccaaggcgagcctggacaggaac
atggcgctgccaggaaagcattggatggacaagaagctaacggacatgacggagagagac
tggagaatcttccgcgaagactttcagatcgcaactcgaggaggtaaaccttgcaacccc
atccgcaactgggaggagagtggactaccgcctgagatcctcgaggcgatcaaggagaag
aagtacaagattccttctcccatccaaatgcagtgcatccctctcggcctcctcaacagg
gacgtggtcggcatcgctcagacaggctccggtaagactgccgccttcgtgcttcccatg
ctcgtctacatctccaagcagccgcccatcactcaagacacggcgcctgaagggcctctc
gcgctcatcctcgctcccacccgcgagctggcgaaccagatctacgacgaggccatcacg
ttctgcaagttcatgaacatccgctgcttcccgctggtgggcggaggaggcgtcaagagt
atcgaggagcagggcttcaccgtcaggcagggagtagagatcctcgtcgctactcctgga
cgtctcatcgactgcttggagagacgcctggtagtgctcaaccagtgcaactatgtcgtg
cttgatgaggccgatcgcatgatcgacatgggcttcgagccccaggtgcaggcgatcctc
gacgccatgccaagctccaacctcaagcccgaggacgacgctgcggaggaaggaaaccaa
gagttcaggtacaggcagacgttcatgttctctgctaccatgccgcccgccattgagcgc
atcacgaggaagtacctgaggaggccggcgtttgtgacggtaggagaagccggtcagacg
gcttctacagtcgagcagcacttcatcttctgctcggagaaccagaagaacgctcgcctc
ctcgacctcctcgcgcgaggaaagcctcccattatggtgtttgtgaacgcgcgcaagaac
tgcgatgtgcttcacaaggagctgagctccaggggccatcgagtgactctgctgcacggt
ggcaagtcgcaggagggacgcgaggaggcgctggactcgttcaagagcggccactacgac
atcatggtctgtacggacgttgctggacgcggcatcgacatctcaggggtggagcatgtg
gtgaatttcgactgtcccaagaacatcgaggactacacgcatcgcatcggaaggacagga
cgagcaggcaaatcgggagtggcgacgacgatcctgaccccggaagacacgcacatctac
tacgacctcaaggagaagcttcaggaaagcaaccagaacgtaccacgagagatcttgtcg
catcctgccgctcagcagaaaccaggagccgttcctcagaagccgcgtcagcaagttcag
tacgtggatgtggaagctgggcggagaggaggaccgcggaattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (76)   

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