KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0285
Entry
HMPREF0424_0285   CDS       T01146                                 
Symbol
infB
Name
(GenBank) translation initiation factor IF-2
  KO
K02519  translation initiation factor IF-2
Organism
gva  Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:gva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:gva03012]
    HMPREF0424_0285 (infB)
   03029 Mitochondrial biogenesis [BR:gva03029]
    HMPREF0424_0285 (infB)
Translation factors [BR:gva03012]
 Eukaryotic type
  Initiation factors
   MTIFs
    HMPREF0424_0285 (infB)
 Prokaryotic type
   HMPREF0424_0285 (infB)
Mitochondrial biogenesis [BR:gva03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    HMPREF0424_0285 (infB)
SSDB
Motif
Pfam: IF-2 GTP_EFTU IF2_N Ras GTP_EFTU_D2 MMR_HSR1 Roc SRPRB MMR_HSR1_Xtn ATP_bind_1 Arf
Other DBs
NCBI-ProteinID: ADB13638
Position
304232..307096
AA seq 954 aa
MVKKRVYELAKEFGVDSKTVLERLKSMGEFVKSASSTVEAPVVRRLQTALASDGNKSEKA
SSASKPAAPKAKPQAKPQAKPQAKDSSHSDSVAGSSANQPVHNTASHFVPKPGANHTRSN
NPSRSNAAAGENRKNDRRNDNRDNRGESRQQAQGQSHSDRSQMPPRPRPHQNAQGAGASA
PRPGNNPFSRKQGMRAPTPGDIPRPHPMSRPGAENGRGGRPGQAGSGPQGSRGERAERGG
RSRGGRSGQGGARSSQWSGQRRGQGGAGAGSGASSRPSAESRFASQGASFQAAAAGAPNG
GPSRGGGRGRAGAAGAFGRQGGKSSKARKNRLAKRREYEELKAPVIGGVRIPSGNGATIR
LRQGATLSDLAEKIDVNPAALVTVLFHLGEMATSTQSLDESTFQILGEEIGWNISIVSAE
EEDKELLQQFDIDLDEEELQEDDDLQSRPPVVTVMGHVDHGKTRLLDTIRKSNVIDREAG
GITQRIGAYQVTVNLEGKPRKITFLDTPGHEAFTAMRARGAELTDVAILVVAADDGVMPQ
TVEAINHAQAAHVPIVVAVNKIDVEGANPEKVRGQLTEYGLVAEEYGGDTMFVDISAKQG
TNVNKLLEAVLLTADAELDPKANPNMDARGATIEARLDKGRGAVATVLVQQGTLHIGDSI
VAGTSYGRVRAMLDENGKHLQDAAPSTPVQVLGLTSVPTAGDLFLVTSDDRSARQIAEKR
AATERAAQLAKRRKVVSLESLKEQFAKSEVDMLNIVIKGDSSGSVEALEDSLMKIEVSEE
VGIQVIHRGVGAITQNDVNLATVDKAVIIGFNVRPNRQVADLADREGVEVKYYSVIYKAI
EDIEAALKGMLKPEFEEVVTSHSEIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILRDGV
ATVNDLEISSLRRFKDDVQSVSEGYEAGINLGSFNDIELGDIIETFEMKQIERK
NT seq 2865 nt   +upstreamnt  +downstreamnt
gtggttaaaaagcgcgtgtatgaactggccaaagaatttggtgtagacagtaaaaccgtg
ttggagcgtttgaagagcatgggcgaatttgttaagtctgcttcttcaacagttgaggct
ccagtagttcgtcgtttgcaaacagcgttagcatctgacggaaataagtccgaaaaggca
tctagtgcaagtaagcctgctgcgccaaaagctaagcctcaagctaagccgcaggctaaa
cctcaagctaaagattcgtcacacagtgattctgtagctggctcttctgctaaccagcct
gtgcacaacacagcttctcattttgttccaaagccgggtgcaaatcatactcgttcaaac
aatccttcgcgttctaatgctgctgccggcgaaaatagaaaaaatgatcgtcgcaatgat
aatcgtgataatcgcggcgaatcgcgacagcaagctcaaggtcaatctcactcagatcgt
tcacagatgcctcctcgccctcgtccgcaccagaatgcacaaggtgcaggcgcatctgct
ccacgtcctggtaataatccgtttagccgtaagcaaggtatgcgtgctcctacacctgga
gatattccacgtcctcatccgatgtctcgtcctggtgctgaaaatggccgcggtggtcgt
ccaggtcaagctggctctggacctcaaggttcgcgtggtgaacgtgcagaacgcggtggc
cgctcgcgtggtggccgctctggtcaaggtggcgcacgctcatcgcagtggtcgggtcag
cgtcgtggtcaaggtggcgcaggtgctggctctggtgcatcttctcgcccatctgcagaa
tctcgttttgcatctcaaggagctagcttccaggctgctgcagcaggcgcacctaatggt
ggtccatcgcgtggcggcggtcgcggtcgtgcaggagctgcaggcgcattcggtcgtcaa
ggtggtaaatcttctaaggctcgtaagaatcgtttagcgaaacgtcgtgaatacgaagag
cttaaagcaccagtgattggcggcgtgcgtattccttctggtaacggcgctacgattcgc
ttgcgtcaaggcgcaactctttctgatttggcggaaaagattgatgtaaatccagcagct
ttggtaactgtgctcttccacttgggagaaatggcaacatctacacaatctttggatgaa
tcaacattccaaattttgggtgaagaaatcggctggaatatcagcattgtttctgctgaa
gaagaagataaagagcttttgcagcagtttgacatcgatttggacgaagaagagctgcaa
gaagatgacgatttgcaatctcgtccgcctgttgttactgttatgggtcacgtcgatcac
ggtaaaactcgcttgcttgataccatccgtaagtcgaatgttatcgatcgcgaagcaggt
ggcattactcagcgtatcggtgcttatcaagtaactgtaaatcttgaaggaaaacctcgt
aagattacgttcctcgatactccaggtcacgaagcgtttactgctatgcgtgctcgcggt
gctgagcttacagacgttgcaattcttgttgttgcagcagacgacggcgtaatgcctcag
actgttgaagctattaaccacgctcaagctgctcatgtgccaattgttgtggctgtgaac
aagattgatgttgaaggtgctaatcctgaaaaggttcgcggtcagcttacagaatacggt
ttagttgctgaagaatacggcggcgacaccatgtttgtggatatttctgcaaagcagggc
actaacgtcaataagcttcttgaagctgtgttgttgactgctgacgctgagcttgatcct
aaggcaaatccaaatatggatgctcgcggtgcaactatcgaagctcgactcgataagggt
cgtggtgctgttgctactgttcttgtgcagcaaggtactcttcacattggtgattctatt
gttgctggcacttcttatggccgtgtgcgcgctatgcttgacgagaacggcaagcatttg
caggatgcggctccttccactcctgttcaggtgcttggtttaacttctgttccaaccgct
ggcgacttgttcttggttacttcggacgaccgttctgctcgtcaaattgctgaaaagcgt
gcagctacagagcgtgcagctcagcttgctaagcgccgcaaggttgtgtctcttgaaagc
cttaaggaacagttcgctaagtctgaagttgacatgctgaacatcgttattaagggcgat
tcttctggttctgttgaagctttggaagattccttgatgaagattgaggtctctgaggaa
gttggcatccaggttattcaccgcggtgttggtgcaattactcagaatgatgtgaacttg
gcaactgtcgataaggctgtgattattggcttcaacgtgcgtccaaaccgtcaagttgct
gatttggcagaccgtgaaggcgtggaagttaagtactactcagttatttacaaggcaatc
gaagatatcgaagctgctttgaagggtatgcttaagccagaattcgaagaagttgttact
tcgcattccgaaattcgcgaaatcttccgttcttccaagttcggcaatattgctggtgtt
atggttcaagatggcgaagtcaagcgcggtacgaagtgccgtattttgcgcgacggcgtt
gctacagtcaacgacctggagatttccagcttgcgtaggtttaaggatgacgtgcaatcc
gttagcgaaggttacgaagctggtattaatctcggcagcttcaatgacattgagcttggc
gatataatcgaaacctttgaaatgaagcagattgagcgcaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (78)   

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