KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0636
Entry
HMPREF0424_0636   CDS       T01146                                 
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00190  Oxidative phosphorylation
gva00650  Butanoate metabolism
gva01100  Metabolic pathways
gva01110  Biosynthesis of secondary metabolites
gva01120  Microbial metabolism in diverse environments
gva01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:gva00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    HMPREF0424_0636
   00650 Butanoate metabolism
    HMPREF0424_0636
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    HMPREF0424_0636
Enzymes [BR:gva01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     HMPREF0424_0636
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 Thi4 HI0933_like NAD_binding_9 NAD_binding_8 Lycopene_cycl
Other DBs
NCBI-ProteinID: ADB13494
Position
complement(707320..709266)
AA seq 648 aa
MQSSEYYDVIIVGAGAAGLSAALGLIKSEEYACMKKEGKTPSILVISKVPALRSHTGSAE
GGIAASLGNVEHDKWQWHYYDTVHGGDWLSDQDAAKLLAKEAPKTVIQLEHDGVAFSRTQ
NGYINQRRFGGHTANFGKNPIERAAFAADRIGHQILHSLWQQCVSENIVFAEDCYVTDVA
INDQTMSVEGIVAFDLSAGDLRAIKSRFLLLATGGSGRLFATTSNSWDLTGDGMALALKA
GLQLEDCEFIQFHPTGLAHTGILLSEAARAEGGVLRNSNGEAFMKKYDEAHADLAPRDVV
SRAIAQEIREGRGVNDSTTTQQSNSHNDCVWLDMTHISRENMLEYLPQVTETIEKYAHLD
PTCDLVPIRPTAHYTMGGIPITLDGKVYRWQNNNQTIVYGLYAAGECSCVGVHGANRLGG
NSLLDACLFGNRAGATIAKELKNLNKDDETNSNKTNETNETNKTFSNNTALQVLYKQRNN
ELNQLMETSAKQATDFTNNSYNDESSQIEEDNPYKLFADLGKIMENAVAISCDEQSIKKA
LNDIQEFIDPKIQSLHIHSNNLVFNQEITAIWEIKNMSLLAKAALQSSLARHESRGAFFR
RDYPKHDISSLPQHSFIDFDGNLAKKSVNIIDFKQDSKGDFYTENSII
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgcaatcaagcgaatactacgatgttattattgttggcgctggagctgcaggattatct
gcagcactaggattaattaaatccgaagaatacgcatgcatgaaaaaagaaggaaaaaca
ccatcaattttagtgatttctaaagtgccagcattgcgttcacacacgggttctgctgaa
ggaggtatagcagcaagccttgggaatgtagagcacgacaaatggcaatggcattattat
gacacagttcatggcggagattggctaagcgatcaagatgcagcaaagctacttgcaaaa
gaagcaccaaaaacagttattcagcttgaacatgatggcgtagcattttctcgaacacaa
aatggatatattaaccaacgccgttttggtggacatactgctaattttggaaagaatcca
attgaacgtgcagcttttgctgcagatcgtattggtcaccaaattttacatagcttatgg
caacaatgtgtttccgagaatattgtatttgctgaagattgttacgtaacagatgttgct
ataaacgatcaaactatgagcgttgaaggaattgttgcatttgatttatctgcaggagac
ttgcgagcaataaagtctagattcctacttttagctacaggcggatcgggaagattattt
gcaacaacatctaattcgtgggatttaacaggcgatggcatggctttagctttaaaagca
ggattacaacttgaagactgcgagttcattcaattccaccctactggactagctcatact
ggtattctgctttcagaagcagcaagagctgaaggcggcgtgcttaggaactcaaatggc
gaagcttttatgaaaaaatacgatgaagcacatgcagatttagctccaagagatgttgtt
tctcgtgcaattgcccaagaaattcgcgaaggcagaggtgtaaacgattcaacaactacg
caacaaagcaattcacataacgattgcgtttggctagatatgacacatatcagccgagaa
aatatgttagaatacttgccacaagtcacagaaactattgaaaaatatgctcatcttgac
ccaacttgcgatttagtcccaattcgtcctacagctcactacacaatgggcggaataccg
ataactttggatggaaaagtatatagatggcaaaataacaaccaaactattgtttatggt
ttatacgctgccggagaatgctcatgcgtaggagtgcacggagctaatcgattaggagga
aactccttgcttgacgcatgcctttttggaaatcgcgcgggagcaacaatagcaaaagaa
ttgaaaaacttaaacaaggatgacgaaactaacagtaacaaaaccaacgaaaccaacgaa
accaataaaactttctcaaataatactgcactacaagtcttatataaacaaagaaataat
gaacttaatcagcttatggaaacaagtgcgaagcaagctacagattttacaaacaacagc
tataacgacgagtcttcacaaatagaagaagataatccttataaattatttgcagattta
ggaaaaatcatggaaaacgctgttgcaatatcatgtgacgaacaatcaattaaaaaagca
ctcaatgacatacaagaatttatagatcctaaaattcaatcattacacatccatagcaat
aatttagtttttaaccaagaaattactgcaatatgggaaataaagaacatgtcactactt
gcaaaagcagcattgcaatcttcacttgctagacatgaatctagaggtgctttctttaga
agagactatccaaaacatgatatttcttcattgccacaacactcgttcattgactttgat
ggaaacttggcaaaaaagtcagtgaatattattgattttaaacaagatagtaaaggagat
ttttatactgaaaatagcataatttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (6)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (41)   

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