KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0944
Entry
HMPREF0424_0944   CDS       T01146                                 
Symbol
leuS
Name
(GenBank) leucine--tRNA ligase
  KO
K01869  leucyl-tRNA synthetase [EC:6.1.1.4]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gva00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF0424_0944 (leuS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gva01007]
    HMPREF0424_0944 (leuS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gva03016]
    HMPREF0424_0944 (leuS)
   03029 Mitochondrial biogenesis [BR:gva03029]
    HMPREF0424_0944 (leuS)
Enzymes [BR:gva01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.4  leucine---tRNA ligase
     HMPREF0424_0944 (leuS)
Amino acid related enzymes [BR:gva01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   HMPREF0424_0944 (leuS)
Transfer RNA biogenesis [BR:gva03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HMPREF0424_0944 (leuS)
 Prokaryotic type
    HMPREF0424_0944 (leuS)
Mitochondrial biogenesis [BR:gva03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    HMPREF0424_0944 (leuS)
SSDB
Motif
Pfam: tRNA-synt_1_2 tRNA-synt_1 Anticodon_1 tRNA-synt_1g
Other DBs
NCBI-ProteinID: ADB14231
Position
complement(1084873..1087857)
AA seq 994 aa
MNDNDQQYATADNKATIAEPAFRYNAQLAQDIEQRWQKTWDEQGTFWAANVKGDLKDGEG
KLADGRPSFFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLP
AEQYAVQTGQHPRITTEANIANMRRQLHRMGLSFDDRRSFATIDTNYVRWTQWIFSKLYD
AWYDTDFVRKDGGKGSARPIAELVDEFKSGKREIPGFAGKKWEELNKVEQADVLNNFRIA
YISKSPVNWCPGLGTVLANEEVTAEGKSERGNFPVFQRNLRQWSMRITAYGHRLVEDLNT
IDWSEKVKLMQRNWIGESHGASVHFEVPCADGETRDLEVYTTRPDTLFGTTFAVVSVDHP
ILEHVPEAWGADVPESWKGGYASLKEGLAEYQAQARAKTAKDRTEDAGAKTGLFTGLYAI
NPVNGAKLPLFAADYVLMGYGTGAIMAVPGGDQRDYDFAKAFGLPVIYTVEPLPDSEEKL
ADYEGKAPFVSHDGIVINSAVEHTHKLGDALSINGLRVDEAIKKVTTWLEAAGVGKGRVS
YRLRDWLFSRQRYWGEPFPIVYDEDGVAHLVPDSELPIALPDVPDYQPKTYAPDDANSEP
EAPLSRNEDWVKVQLDLGDGVKTYYRDTNTMPNWAGSCWYYMRYLDPNDAEHMVDSDEYD
YWMGTNRPGKEHVSGGVDLYVGGVEHAVLHLLYSRFWHKALYDLGYVDSAEPFHRLFNQG
MIQAYAYTDERGQYVPADEVEEGASNSAGEPTFTWHGESVNREFGKMGKSLKNIVTPDYM
YENYGADTFRLYEMSMGPLSESRPWNTRNVVGGMRFLQRLWRNVVNEETGACVVTDDALD
EKTLKILNNTIAEVTVEMEAMRPNTAIAKLIVLNNHLTSLPHVPRAAVEPLVLMLAPIAP
HICEEMWSKLGHAKSIAHADWPVADSRYVGEDTVTAVVQIKGKVRAKLEVDPNIDASELE
KLALEAVADRLGGKAPRKVIVKAPKIVSIVPDES
NT seq 2985 nt   +upstreamnt  +downstreamnt
atgaacgacaacgatcaacagtatgcaacagctgacaacaaagctactattgctgagcca
gcttttcgttacaacgcgcagctcgcacaagatattgagcagcgctggcaaaaaacctgg
gatgaacaaggtacgttctgggctgctaatgttaaaggcgatttgaaggatggtgaaggc
aagcttgctgacggtcgtccttctttctttgcaatggacatgttcccgtatccttccggc
aaaggcttacacgttggacatcctcttggatatttggcaacggatgttgtaagccgctac
catcgcatgaagggtgagaatgttcttcatgcaatgggttacgacgcttttggtttgccg
gcggaacagtacgctgttcaaactggtcagcatccgcgcatcaccactgaggcaaatatt
gctaatatgcgcaggcagttgcatcgtatgggcttgagttttgacgatcgtaggtctttt
gcaacgattgacacaaattatgtgcgttggacgcaatggattttctcgaagctttatgac
gcttggtatgacactgattttgtgcgcaaagacggcggaaagggttctgctcgtccgatt
gctgaactcgttgatgagtttaagagcggcaagcgcgaaattcctggttttgcaggcaaa
aagtgggaagagcttaataaagtagagcaagcggatgtattaaacaatttccgcattgct
tatatttctaaatctcctgtaaattggtgcccaggcttgggaactgtgcttgcaaacgag
gaagttactgcagaaggtaagtctgaacgcggaaacttcccagtattccagcgcaacctt
cgccagtggtccatgcgaattaccgcttatggacaccgcttggtggaagatttgaacact
attgattggtcagaaaaagttaagcttatgcagcgaaactggatcggcgaatctcacggt
gcatctgtgcactttgaagtgccatgtgcggacggcgaaacgcgcgatttggaagtgtac
actactcgtccagacacgctttttggtacaacgtttgcggttgtttccgtagatcaccca
attcttgagcatgttccagaagcttggggtgcggacgttccagaaagctggaagggcggt
tacgcaagtcttaaagaaggcttggcagagtatcaagctcaagctcgcgcgaagactgct
aaagatcgcacggaagatgcaggagcaaaaaccggcttgtttactggtctttacgcaatt
aatcctgtaaatggagcaaaacttccgctgtttgctgctgactacgtgcttatgggttac
ggtacaggcgcaattatggcggttcctggcggcgaccagcgcgattatgatttcgcaaaa
gcattcggtttgccagtaatttacactgttgagcctttgcctgattccgaagaaaagttg
gcagattacgaaggtaaagctccgtttgtttctcacgacggaattgttattaattcagca
gtagaacatacgcacaagcttggtgacgctttgtctattaacggtttgcgcgtagacgaa
gctattaaaaaggtgactacttggcttgaagctgcaggcgtaggaaaaggtagggtttct
taccgacttcgcgactggctgttctctcgccagcgctactggggtgagccattcccaatc
gtttatgacgaagatggtgttgctcacttagtgccagatagcgagcttccaattgcattg
ccggacgttcctgactatcagccaaaaacttacgctccagacgatgcaaattcggagcct
gaagcacctttgagccgaaacgaagattgggtaaaagttcagctcgaccttggcgatggc
gtaaaaacctactatcgtgacaccaacactatgccgaactgggctggttcttgctggtat
tacatgcgctacttggatccaaacgatgctgagcatatggttgacagcgatgaatacgac
tactggatgggcacaaaccgtccaggaaaagagcacgtatctggaggcgttgacctttac
gttggtggtgtagagcatgcagttttgcacttgctttactcgcgcttctggcataaggcg
ctttacgacttgggttacgtggattctgctgaaccattccaccgcttgtttaaccagggt
atgattcaagcttacgcttacacggatgagcgcggacagtacgttcctgctgacgaggtt
gaagaaggtgcttcaaacagcgctggtgagccaacctttacatggcatggcgagagcgtg
aaccgcgagttcggcaaaatgggcaagagcttaaagaatattgtgactccagattacatg
tacgaaaactacggtgcagatacgttccgcttgtacgaaatgagcatgggtccgctttct
gagtctcgtccatggaacacgcgtaacgttgttggtggcatgcgattcttgcagcgcttg
tggcgtaacgttgtgaacgaagaaaccggagcttgcgtggtaactgacgacgctttggat
gagaagacgttgaagattcttaacaacacaattgcagaagtgactgtggaaatggaagca
atgcgtccaaatactgcaattgctaagctgattgtgcttaacaaccacttgacttcgctt
cctcacgtgccgcgagcagctgtcgagccgctggttcttatgctggctccaatcgcgccg
catatttgcgaagaaatgtggagcaagcttggacacgcaaagtcgattgctcacgcagat
tggcctgttgcggattctcgctacgttggtgaggatactgttactgccgttgtgcaaata
aagggcaaggttcgagcaaagcttgaagttgatccaaatattgacgcttctgaacttgaa
aagcttgcgctagaagctgtagctgatcgcttgggcggtaaggctccgcgcaaggtgatt
gtgaaggctccgaagattgtgtctattgtgccggacgaaagctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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