KEGG   Gardnerella vaginalis 409-05: HMPREF0424_1311
Entry
HMPREF0424_1311   CDS       T01146                                 
Name
(GenBank) DNA-binding helix-turn-helix protein
  KO
K14260  alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00220  Arginine biosynthesis
gva00250  Alanine, aspartate and glutamate metabolism
gva00290  Valine, leucine and isoleucine biosynthesis
gva01100  Metabolic pathways
gva01110  Biosynthesis of secondary metabolites
gva01210  2-Oxocarboxylic acid metabolism
gva01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:gva00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    HMPREF0424_1311
   00290 Valine, leucine and isoleucine biosynthesis
    HMPREF0424_1311
   00220 Arginine biosynthesis
    HMPREF0424_1311
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gva01007]
    HMPREF0424_1311
Enzymes [BR:gva01000]
 2. Transferases
  2.6  Transferring nitrogenous groups
   2.6.1  Transaminases
    2.6.1.2  alanine transaminase
     HMPREF0424_1311
    2.6.1.66  valine---pyruvate transaminase
     HMPREF0424_1311
Amino acid related enzymes [BR:gva01007]
 Aminotransferase (transaminase)
  Class I
   HMPREF0424_1311
SSDB
Motif
Pfam: Aminotran_1_2 DegT_DnrJ_EryC1 Aminotran_5 HTH_3 Beta_elim_lyase HTH_19 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: ADB13803
Position
1566274..1567800
AA seq 508 aa
MAQNFADELKKAMKRKGYKQIDVIELAAKNGHKLGKSQLSQYLSGKTEPRKDVRNMLAEI
LGISSDGIKGGHSCAKIEQNCQSAEEPQLNQPQLTEAELSQTLKHRTFNKSTKLEHVLYD
VRGPVVEEANRMEANGTHILKLNIGNPAPFGFRAPDEVIYDMQQQLIDCEGYSDSRGLFS
ARKAIMQYDQLKGIPGVQMEDIYTGNGVSELINLSMQALLDCGDEILIPSPDYPLWTACA
SLAGGTPVHYMCDEKSHWYPDIADIRSKITPRTKAIVIINPNNPTGVLYSREVLEEIVKI
AREFNLIIFADEIYDRLVMDGKKHISIASLAPDVFCVTFSGLSKSHMIAGFRIGWMSLSG
DKSKARDYIMGLNMLSNMRLCSNVPAQSIIQTALGGYQSVEKYLEPGGRVYEQREYCYNA
LQEMDGVSVERPDAAFYMFVKLDPSRYNIHDDEQFALDLLRDQKLLIVHGKGFNWQTPGY
FRVVYLPRLQTLRDAMGKLANFLSYYRQ
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggcacagaattttgctgatgagcttaaaaaagctatgaagcgtaaggggtacaagcag
attgacgtaatcgagcttgcagcaaaaaacggtcataaacttggtaaaagccagttaagc
cagtatttaagcggcaaaaccgagcctcgcaaagacgtacgtaacatgctagctgaaatt
cttggaatcagcagcgacggaatcaaaggcggtcattcttgtgcaaaaatcgagcaaaac
tgccagtctgcagaagaaccacaattaaatcagccacagcttacagaagctgaactttcc
caaacactcaaacatagaaccttcaacaaatcaaccaaactcgagcacgtgctttatgac
gttcgcggcccagttgttgaagaagcaaaccgcatggaagcgaacggaacgcatattcta
aagctcaacattggaaatcctgcgcctttcggattccgcgctccagacgaagtgatttac
gacatgcaacagcagcttattgactgcgaaggctactcggatagtcgtggacttttctcc
gctcgcaaggcgattatgcaatacgatcagcttaagggcattccaggcgtgcaaatggaa
gatatttacactggaaacggagtttccgagctgattaatctttctatgcaagcgctgctt
gattgcggcgacgagattcttatcccaagcccagactatccgttgtggactgcgtgcgct
agcctggctggaggtactcctgtgcactacatgtgtgacgaaaagtcgcattggtaccca
gatattgccgacattcgctctaaaatcacgcctcgcactaaagcaatcgtgattattaac
ccgaataatcctacgggtgtgctgtatagtcgcgaagttttggaagagattgttaagatt
gcgcgcgagtttaatttgattatttttgcggacgagatttacgaccgtcttgttatggat
ggcaagaagcatatttcgattgcttctcttgctccagacgtattctgcgtaactttcagc
ggactttctaagtcgcatatgattgctggcttccgtattggttggatgagtctttcggga
gataaatccaaggctcgcgactacattatgggtcttaatatgctgtctaatatgcgcttg
tgctcgaacgttcctgcgcagtcaattattcagactgctttgggcggataccagagcgtt
gaaaagtatttggaaccaggcggacgcgtgtatgagcagcgcgagtattgctataacgcg
cttcaagagatggatggcgtaagcgttgagcgaccagacgctgctttctacatgtttgta
aagctcgatccaagtcgatacaacattcacgacgacgaacagtttgcgcttgatttgcta
cgcgatcagaagttgctgattgtgcacggcaaaggctttaattggcagactccaggctac
ttccgcgtagtctacttgccgcgcttgcaaacgcttcgtgacgcaatgggcaaactcgct
aacttcctctcctactatcgccagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

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