KEGG   Gardnerella vaginalis ATCC 14019: HMPREF0421_20849
Entry
HMPREF0421_20849  CDS       T01344                                 
Name
(GenBank) pseudouridylate synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
gvg  Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:gvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gvg03009]
    HMPREF0421_20849
Enzymes [BR:gvg01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     HMPREF0421_20849
Ribosome biogenesis [BR:gvg03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HMPREF0421_20849
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ADP38931
UniProt: E3DA37
Position
complement(1041493..1042266)
AA seq 257 aa
MPNAYSRANQAQQESKNAVRLQKLLAEAGFGSRRKCEEIILDGRVEVDDELVTTLGTRVD
PSKQKIRVDGSRVKFNHKLVTLALNKPKRVLSAMDDPKGRFTLRDIVGDKYERIFHMGRL
DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATVEGKINGMVCRRLVSQGVNLEDGWIK
LDRCAIIDQNHDATIVKVVLHSGKNRIVRRIFGAVGYPVKRLVRTQIGPIKLGDLKAGSY
RVLSQTEVRSLSKEVGL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccaaacgcatattcccgcgccaatcaggcgcaacaagaatccaaaaacgctgttcga
ctgcaaaagctacttgctgaagcgggatttggttcacgccgaaagtgtgaagaaataatc
ttagatgggcgtgttgaagtagatgatgagcttgtaacaacactcggaactcgagtagat
ccaagtaaacaaaaaatacgcgtagacggatcgagagtgaaatttaatcacaagcttgta
acgctcgcgcttaataagcctaaaagagttttgagcgcaatggatgatccaaaaggtcgc
ttcactttaagagacattgttggagataagtacgagcgaattttccacatgggacgcttg
gactacgattctgaaggtcttattttaatgaccaacgatggtgagttaagccagcatgtt
atgcatccaaagtatgaagttgagaaaacgtatattgcaactgttgaaggcaagatcaac
ggaatggtttgccgcaggctagtttcgcaaggcgtaaatctggaagacggctggattaag
ctcgatcgctgtgcaataatcgaccaaaatcacgatgcaacaatcgtaaaagttgtttta
cactctggcaaaaatcgcattgtgcgcaggatttttggagccgtaggatatcctgtaaag
cgtcttgtgcgtactcaaattgggcctattaagttaggggacttaaaagctggatcgtat
cgagtgctttctcaaacagaagtgcgctcgctttctaaggaggttggcctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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