KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0722
Entry
HMPREF9231_0722   CDS       T01939                                 
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
  KO
K03977  GTPase
Organism
gvh  Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gvh03009]
    HMPREF9231_0722 (der)
Ribosome biogenesis [BR:gvh03009]
 Prokaryotic type
  GTPases
   HMPREF9231_0722 (der)
SSDB
Motif
Pfam: MMR_HSR1 Cytidylate_kin KH_dom-like FeoB_N GTP_EFTU Dynamin_N RsgA_GTPase Ras Roc AAA_18 AIG1 ABC_tran AAA_28 AAA_16 AAA_22 AAA Arf Ploopntkinase3 AAA_17 SpoIVA_ATPase ATP_bind_1 MeaB AAA_25 ADK
Other DBs
NCBI-ProteinID: AEF31705
Position
859866..862070
AA seq 734 aa
MICVAIDGPAGVGKSSTSRALAQYYGFAYLDTGAMYRAAAWWCLKQGIDLSKQLELDEEG
NPTNSADAKRLNQIVEAVGALFTEDHAEFSVDPKNPVVVIDSEDISEELRSSEVSSHVST
VSSIPAVRRMLIAAQRAYIASESSEDSFSGGEGIVAEGRDITTVVAPNAQVRVLLTAREE
VRQARRDKQDIAQENLQNNQSKNNESEEDDIRARDAKDAKVTNFLKAADGVTTLDNSDLT
FEQTLDALVEIVDDAIEQDEYDRYAANLEGYDLDDEDRALLSGDFASDDESKDTKAVGVI
AVIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGWEADVE
GIDSSIAQQAQVAVRLSDAVIFLVDGQVGLTATDERIVSMLRAAGKPITLAVNKVDDARS
EYLTAEFWKLGMGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFLTPEGLRRVALVGR
PNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRVDGEDWLFIDTAGIKRRQHKLTGA
EYYSSLRTQAAIERSELALILFDSSQPIAEQDLKVMSQAVDAGRAIVLVFNKWDLMDEFS
RQRMERLWKTEFERVTWAERVNLSAKTGWHTNRLARAMRTALDSWDKRIPTGKLNAFLGR
IQSAHPHPLRGGKQARILFATQASTRPPRFVIFATGFLEHGYRRFIERSLREEFGFEGTP
IQISVKVRDKKKRK
NT seq 2205 nt   +upstreamnt  +downstreamnt
gtgatttgcgtagcaattgatggaccagcaggagtaggtaaatcttctacttctcgtgct
ttagcgcaatactatggttttgcgtatttagatacgggggcaatgtatcgagctgctgct
tggtggtgcttgaagcaaggtattgatttaagcaagcagcttgagttggatgaagaagga
aatccaacgaattctgcagatgcaaaacgcttgaatcaaattgttgaagctgttggagca
ttgtttacggaagatcatgctgaatttagtgttgatccaaaaaatcctgtagtcgtaatt
gatagtgaagatattagcgaagaattgcgttccagcgaagtttcttcgcacgtgtctacg
gtttcttcgattcctgcagttcgacgcatgcttattgctgctcagcgcgcgtatattgct
tcagagtctagtgaagattctttctcaggcggagagggaatagttgcagaaggacgcgat
attactactgttgtagctccaaatgctcaagttcgagtgcttcttactgctcgtgaggaa
gtgcgtcaagctcgcagagataagcaggatattgcgcaagaaaatttgcaaaataatcaa
tctaagaataatgaatctgaagaagacgatattcgcgctcgtgatgctaaagatgctaaa
gttacgaattttcttaaagctgcagacggtgttacaactctagataattctgatttaact
tttgagcagactcttgacgcgcttgtagagattgttgacgatgcaattgagcaagatgag
tacgaccgttatgctgcaaatcttgaaggctacgatcttgatgatgaagatcgtgcgctt
cttagtggtgattttgcaagcgatgatgaatcgaaagatacaaaagctgttggagtaatc
gccgttataggtcgaccaaacgttggaaaatcaacgcttgtaaatcgtattttgggtcat
cgtgtcgctgttgtagaagatactccaggtgttactagagatcgcgtaagttacgacgct
gagtgggctggaaccaacttcaagctggttgacactggcggctgggaagcagatgttgaa
ggcattgattcttctattgctcagcaagcgcaagtggcagtgcgtttaagcgatgctgtg
attttcctagtagatggtcaagttggtttaacagctacagacgagcgcattgtttcaatg
cttcgcgctgcaggtaagcctattactctggcagttaacaaggttgacgacgctagaagc
gagtatttaactgcagagttttggaagctcggaatgggtgagccttacggaatttctgca
atgcatggcagaggcgttggagatttgcttgacgcggctcttaactctttgaagaaagcg
aataaaacttcaggattcttgactccagaaggacttcgcagagttgctttagttgggcgt
ccaaacgttggtaagtcttcgcttttgaaccatttagctcatgaagaacgttctgttgta
aacgatttggctggaactactcgagatcctgttgatgaggttgtgcgagttgatggagaa
gactggctgtttattgacactgctggtattaagcgcaggcagcataagcttactggtgct
gaatactattcttcacttcgtacgcaagctgcgattgagcgttctgaacttgctttgatt
cttttcgattcttcccagccgattgcagagcaggatttgaaagttatgagccaggctgta
gacgcgggtcgagcaatcgtacttgtgtttaacaagtgggacttgatggacgaattttct
agacagcgcatggaacgcttgtggaaaactgagtttgagcgcgtaacttgggctgagcgc
gttaatctctccgcaaaaacaggatggcatacgaatcgtcttgcgcgcgctatgcgaaca
gctttagacagctgggataagcgcattcctacaggcaagctcaacgctttcttaggtcgt
attcagtctgctcatccgcatcctttgcgaggcggaaagcaagcgagaatcttgtttgct
actcaggcttctacgcgcccaccgcgtttcgtgatattcgcaacaggcttcttagagcac
ggttaccgtcgctttattgagcgttctcttcgagaagagtttggatttgagggaactcct
attcaaatctctgtaaaagtacgagataagaagaagcgcaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (30)   

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