KEGG   Halomonas sp. GFAJ-1: BB497_02295
Entry
BB497_02295       CDS       T05375                                 
Name
(GenBank) ABC transporter permease
  KO
K02034  peptide/nickel transport system permease protein
Organism
hag  Halomonas sp. GFAJ-1
Pathway
hag02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hag00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BB497_02295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:hag02000]
    BB497_02295
Transporters [BR:hag02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    BB497_02295
SSDB
Motif
Pfam: BPD_transp_1 OppC_N PSII_BNR SGL
Other DBs
NCBI-ProteinID: AVI61614
UniProt: H0J0E9
Position
complement(525329..527065)
AA seq 578 aa
MNRSRFLKSAQEPVKAVLGDRLALVGLFVLLSIIAMALFAPFLSTHEPLAVNEREEGSLF
LRSDDGDQVHWVASSPLGEVTLNAADYRDGLGMAVGRDGVVWRYAGGDWSPLDTPITTTL
NAVNIREDGATLVAGAQGTVALWSPDDSWQTFEMPDPLSVNGIAWRDDDTALLVGGGETV
WLLSLDSGEVTSLVSPVGRGFELNAVALDTDGSAWLVGDRGIALRLDPQDDSLSLERLPG
NRELNHIHIADSGAGLIVGERGTVLVREDAQARWQSQSAPDSRAMRAGWITDEGHAFAVG
RSGIVFEREPGGEWQLVPSDEERHLRALMVTEDSFFAIGSDRFVNRLAPPSGEHWFGTDH
LGRDLFSQNVHGSQIALLVGFLGASLVVLIGANVGLVAGYFRGRTETVLMRTVDVMYGIP
FEPFALILVLLFEPSLFIVILAVSLLTWRTVARLIRSQVLSLRERPFVKAARVAGASDLR
IMYLHIFPNVMPLVFLELAIIVGVSIIAEATLSFLGLGPPQSISWGGILHNARLSGAWRE
AWWWNLPPGLLIMITVLSVFFISRSLELVANPRLRARR
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgaaccgatctcgatttctgaaaagtgctcaggagcctgtaaaggctgttctgggcgat
cggctggcgctcgtgggtctcttcgtgctgctgtcgattatcgctatggcgttgtttgcg
ccgtttctatccacccatgagccgctggctgttaacgagcgcgaggagggctcgctgttc
ttgcgtagcgacgacggtgaccaagtacattgggtggcatcttcaccgctcggcgaagtc
acccttaatgctgccgactaccgcgatgggctaggaatggcagtaggccgcgacggtgtg
gtgtggcgctatgcgggtggtgattggtcgcctctcgatacacctatcaccacgacgctg
aacgccgtcaatattcgtgaagacggtgcaaccctggtggctggggctcaaggtacggtg
gcgctgtggagtccagatgacagctggcaaacttttgagatgcccgatccgctaagtgtc
aatggcatcgcttggcgcgacgacgacacagcactgttggtgggcggtggagaaacggtc
tggctattgagcttggacagcggagaggtgacatcgctggtgagccccgtgggtcgtggc
ttcgagctcaatgcggtggcgctggacacagacggaagcgcctggctggtcggtgaccgt
ggtatagcgctccgccttgacccccaggacgatagcctgagcttggagcggttgcccggc
aatcgtgaactcaatcatatccatattgcggatagcggggcggggctgattgttggcgag
cggggaaccgtgctggtacgtgaggatgcccaggctcgttggcagagccagagtgctccg
gactcccgcgccatgcgcgctggttggataaccgatgagggccatgcgttcgcggtgggg
cggagtggtattgtcttcgagcgtgagccaggaggcgaatggcagctggtgcccagtgac
gaagagcgccacttaagggcgttaatggtcaccgaagatagcttctttgctatcggctcc
gatcggtttgtgaatcgcttggcaccgccgagcggtgagcactggtttggtaccgatcac
ctgggtcgcgacctgttcagtcagaatgttcacggttctcaaattgccctgctggtaggc
tttcttggcgcctccctggtggtattgataggtgccaatgtgggactggtggcaggatac
ttccgtggccgcaccgagaccgtgctgatgcgcacggtagatgtgatgtatggcattccc
tttgagccttttgcgctgattctggtgctgctgtttgagcccagtctctttattgtgatt
ttggcggtatcgctactgacctggcgaaccgttgcgcggctgattcgctctcaggtcctg
agcctgcgtgaacgaccgttcgttaaagccgcacgtgtggcaggggcgtccgatttgcgc
attatgtatctgcatatcttccctaacgttatgccgctggtattccttgaattggcaatt
attgtcggggtgtcgatcattgcggaagccacgctatccttcttgggattaggccccccc
caatcgatctcttggggtgggattttgcacaatgctcgcctatccggcgcctggcgcgag
gcgtggtggtggaatctaccaccgggcctgctaattatgatcacagtgctctcagtgttt
ttcatctctcgctcacttgagttagtcgccaatccacgtttgagggcacgtcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system