KEGG   Halophilic archaeon DL31: Halar_2844
Entry
Halar_2844        CDS       T01603                                 
Name
(GenBank) DNA topoisomerase type IA zn finger domain protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
hah  Halophilic archaeon DL31
Brite
KEGG Orthology (KO) [BR:hah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hah03032]
    Halar_2844
   03400 DNA repair and recombination proteins [BR:hah03400]
    Halar_2844
Enzymes [BR:hah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Halar_2844
DNA replication proteins [BR:hah03032]
 Prokaryotic type
  DNA Topoisomerases
   Halar_2844
DNA repair and recombination proteins [BR:hah03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Halar_2844
SSDB
Motif
Pfam: zf-C4_Topoisom Auto_anti-p27 NucS_N zinc-ribbons_6 HypA Zn_ribbon_recom Amelotin HMBD DNA_ligase_ZBD
Other DBs
NCBI-ProteinID: AEN06476
Position
complement(2054997..2055782)
AA seq 261 aa
MTGPPRHVTKTVRLFAGDCTVTFEGERDRTQRGYVLVVVKPDRTVLVHDAAGYQPVAWLT
RADEVTTETEDDSFSVTATAGDQRLHVVSAATVGQRELRISEAGAPVGSCPDCGDALVRT
GGDVVCLGCDERYGLPAGATVLEESCPDCGLPTMRVERGEELELCLDWRCESLADAVADV
LDGRWDCPDCGEPLGVVNRGNRPFLGCDAYPACETTFSIPAGVAVGECSCGLPVFETAAG
RRCLDGTCDRFRDHVETHDGP
NT seq 786 nt   +upstreamnt  +downstreamnt
atgacgggaccaccccggcacgtgaccaaaacagtacgactgttcgcaggcgactgcacc
gtcacgttcgagggcgagcgcgaccggactcagcgcggctacgtgctggtggtcgtcaaa
cccgaccgcaccgtgctagtccacgacgccgccggctaccagccagtcgcgtggctcacc
cgggctgacgaggtgacgaccgaaaccgaagacgactcgttctcagtgaccgccaccgcg
ggcgaccaacggctccacgtcgtttctgcggcgacggtgggccagcgcgaactccggatc
tccgaggcgggggcgccggtcggttcgtgtccggactgcggcgacgcgctcgtccgcacg
ggtggcgacgtggtctgtctgggctgtgacgagcgctacggcctcccggcgggggcgacg
gtgctcgaagagtcgtgtccggactgcgggctcccgacgatgcgggtcgaacgcggtgag
gaactggagctctgtctggactggcgctgtgaatcgctggccgacgcggtcgctgacgtg
ctcgacggccgctgggactgtccggactgcggcgagcccctgggcgtcgtgaaccgcggg
aatcggcccttcctggggtgtgatgcctaccctgcgtgcgagacgacgttctctatcccc
gcgggcgtggccgttggtgagtgttcgtgtggactgcccgtgttcgagacggctgcaggg
cggcgctgtctcgacgggacctgcgaccggttccgtgaccacgtcgagacacacgacggt
ccctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (31)   

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