KEGG   Halophilic archaeon DL31: Halar_3180
Entry
Halar_3180        CDS       T01603                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
hah  Halophilic archaeon DL31
Pathway
hah03030  DNA replication
hah03410  Base excision repair
hah03420  Nucleotide excision repair
hah03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Halar_3180
   03410 Base excision repair
    Halar_3180
   03420 Nucleotide excision repair
    Halar_3180
   03430 Mismatch repair
    Halar_3180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hah03032]
    Halar_3180
   03400 DNA repair and recombination proteins [BR:hah03400]
    Halar_3180
DNA replication proteins [BR:hah03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Halar_3180
DNA repair and recombination proteins [BR:hah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Halar_3180
   MMR (mismatch excision repair)
    Other MMR factors
     Halar_3180
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Halar_3180
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AEN06796
Position
complement(2388467..2389210)
AA seq 247 aa
MFKAIVNASTLRDSLDAVSVLVDECKIRLNEEELSIRAVDPANVGMVDLTLEAAAFESYE
ADGGVIGVNLDRLEDIAGMAESDDLVHLKLDEETRKLHIEVEGLSYTLALIDPDSIRQEP
DIPDLDLPAEITLEGAQLNRGIKAADMVSDHIRLRVDEGDETFHIEAEGDTDDVDLELTS
EGLIALQAGPADSLFSLDYLKDMNKAINADAEVRVELGEEFPVKLHYEFAEGLGNVTFML
APRIQSE
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgaacgcgtcgacgctccgggactcactcgacgcggtgagcgtg
ctggtcgacgagtgcaagatccgcctgaacgaggaggaactctccatccgtgccgtcgac
ccggcaaacgttgggatggtcgacctcaccctcgaggccgccgcgttcgagtcctacgag
gccgacggcggcgtcatcggcgtcaacctcgaccgcctcgaggacatcgccggcatggcc
gaaagcgacgacctggttcacctcaaactcgatgaagagacccgcaagctccacatcgaa
gtcgaggggctctcctacacgctggcgctcatcgaccccgactccatccgccaggagccg
gacattccggacctcgacctgcccgccgagatcacgctggagggtgcccaactcaaccgc
gggatcaaggccgcagacatggtctctgaccacatccggctgcgcgtcgacgaaggcgac
gagacgttccacatcgaggccgagggcgacaccgacgacgtcgacctggaactcacctct
gagggcctcatcgcgctacaggctggccccgcggactcgctgttcagcctcgactacctg
aaagacatgaacaaggccatcaacgctgacgcggaggtccgcgtggaactcggcgaggag
ttcccagtgaagctccattacgagttcgccgaggggctggggaacgtgacgttcatgctc
gccccacggattcagagcgagtaa

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