KEGG   Halomonas sp. R57-5: HALO4120
Entry
HALO4120          CDS       T04029                                 
Name
(GenBank) Signal recognition particle protein-Fifty-four homolog
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ham  Halomonas sp. R57-5
Pathway
ham02024  Quorum sensing
ham03060  Protein export
ham03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ham00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HALO4120
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HALO4120
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HALO4120
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ham02044]
    HALO4120
Enzymes [BR:ham01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HALO4120
Secretion system [BR:ham02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HALO4120
  Eukaryotic Sec-SRP protein
   HALO4120
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_16 Helicase_RecD YqeC ArsA_ATPase AAA_31 AAA_33 AAA_30 AAA_14 KTI12 APS_kinase DO-GTPase1 nSTAND3 ResIII 6PF2K Thymidylate_kin AAA_19 ParA TctA AAA_28 VirC1 AAA_17 NACHT AAA_24 TsaE
Other DBs
NCBI-ProteinID: CEP37802
UniProt: A0A0D6EE78
Position
I:complement(4502437..4503864)
AA seq 475 aa
MFQNLSERLSQTLKSIKGQARLTDDNIKDTLREVRRALLEADVALPVIKEFIERVRERAV
GQEVSKSLSPGQQFVKIVQQELEAIMGEANDGFVLKGSPAVVLMAGLQGAGKTTSVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAKEVEVDFFPSRSDQQPVAIAEAAIKHAKI
QFHDVVLIDTAGRLAIDEAMMAEIQALHKAVSPQETLFVVDAMTGQDAANTAKAFSEALP
LTGVILTKADGDARGGAALSVRHITGKPIKFMGMGEKVDALEPFHPDRVASRILGMGDML
SLIEEAERTVDKSKADKLAKKVKKGDGFDLEDFRDQLQQLKKMGGMGGLMGKLPGMGQMA
EMAQGPGPEKELGKLEALINSMTPKERRKPDIINGSRKRRIAAGAGLQVPDLNRLLKQHK
QMQKMMKKAGQKGGMQKMMRGMSGMMGGGGPGGPGGMGGPGGMGGMGGPGGLPRR
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgttccagaatctaagtgagcgtctttcccagacgttaaagtcgattaagggtcaggct
cgcctgaccgacgacaatattaaagataccctgcgcgaagtacgccgcgcactgcttgag
gccgatgtagcactgccggtcatcaaggagtttatcgagcgcgtacgcgagcgggcggtc
ggccaggaagtatccaaaagcctgtcgcctggccagcagttcgtcaaaatcgtccagcaa
gagctggaagcgattatgggcgaagccaacgacggctttgtgctcaagggttctcccgcc
gttgtgttgatggccggtctgcaaggcgcgggtaaaaccacttctgtggccaagctggcc
cgctacctgcgcgagcgcgaaaagaaaaaagtattggtagtgtctgccgacgtctaccgc
ccggcggccatcgaccaactggaaaccctggccaaagaggtcgaggtagatttcttcccc
tcacgctctgaccagcagccggttgcgattgccgaagctgccatcaagcacgccaagatt
cagtttcacgatgtggtgctgatcgataccgccggtcgtctggcgattgatgaagccatg
atggcggagatccaggcgctgcataaagcggtttcccctcaggaaacgctgtttgttgtc
gatgccatgaccggccaggatgccgccaataccgccaaggcatttagcgaagcgctgccg
ctgaccggggtgatcctgaccaaagctgatggtgatgcccgcggcggtgccgcgctgtcg
gtacgccacattactggcaagcccatcaagtttatggggatgggcgaaaaagtggacgct
ctggagccgttccaccccgaccgggtagcctcgcgtatcctgggcatgggcgacatgctg
tcgctgatcgaggaagccgagcgcaccgtcgataaatctaaagccgacaagctggccaaa
aaggtcaagaaaggcgacggttttgatctggaagatttccgcgaccagctccagcagctc
aagaaaatgggcggcatgggtggtctgatgggcaaattgcccggcatggggcagatggct
gaaatggcccaaggccctggccctgagaaagagctgggtaagctggaagcgctgattaac
tcaatgacgcctaaagagcgccgcaagcctgatatcatcaatggctctcgcaagcgccgc
atcgccgctggtgcgggcctgcaggtgcctgacttgaatcgtttgctcaagcagcataag
cagatgcagaagatgatgaagaaagcgggtcaaaaaggcggcatgcagaaaatgatgcgt
ggtatgtcaggcatgatgggcggcggtggcccgggaggcccaggtggaatgggcgggccc
ggcggcatgggcggtatgggtggccctggcggattgccccgccgttaa

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