KEGG   Helianthus annuus (common sunflower): 110872523
Entry
110872523         CDS       T05101                                 
Name
(RefSeq) uncharacterized protein LOC110872523
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110872523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:han03000]
    110872523
   03019 Messenger RNA biogenesis [BR:han03019]
    110872523
   04121 Ubiquitin system [BR:han04121]
    110872523
Enzymes [BR:han01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110872523
Transcription factors [BR:han03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    110872523
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110872523
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110872523
Ubiquitin system [BR:han04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110872523
SSDB
Motif
Pfam: zf-RING_4 RRM_1 Baculo_IE-1 zf-UDP FYVE
Other DBs
NCBI-GeneID: 110872523
NCBI-ProteinID: XP_021977026
Position
8:complement(30583802..30589214)
AA seq 711 aa
MSGEEEKKCPLCAEEMDWTDQQLNPCKCGYEVCVWCWHHIMDMAEKDATEGRCPACRTPY
DKDRVVGLEANFQRVVGNSSSQKQKVLKGKSKTSESRKDLSNVRVIQRKMAYIIGLPLDL
ADEDLLQRKDYFGKYGKVTKVSLSRTAGGALQQFVNDTCSVYITYSKEEEAVTCIQSVHG
YVLDGRPLKASFGTAKYCHAWLRNTPCNNPTCLYLHTIGAEEDSFGKDEAAAVHTRNRVQ
EIVGSTKYVHRRSGSTLPPPVVEQFNHNASAEDPVYDGMKDVGYAPIKPSKEATTFVDMV
CSDSKHVEIERSDSVQYTSSNPNQFVDSPTFDDKKSKDSFKNYSDPWYDTENDNQISADH
YVLNSYVDEEDNSNIQPSQYTDSTLNDGYNENKFQSLAKSDKIYRGANSFSNEEIVEHLR
RLDHDAPLVDDDEDSAALESSIISNILSIDLDGDDSPYPQTVAGLLQPKDARSWNFQNND
QSIFSFANEHRFSGQQNDLSTSTIASRVQNSTPPGFSATIKPPPGFSSCMRAEQAVAAGS
GNYMRTGPNALYGSPFLGNLYNINGDVGKLSTNFLNNSWSSSFDEDTKPWLFMQQQSVPQ
FSQPTMLQPQQHTTPQFPSQVDLYGGLTSGLADLHHQSYNSTPSLFTQQPKFEGGGFQQH
NPLQEVQVQQQGGTRGEVQKYGFDSLLSDYGDYMFQTPTSGDLYTPRVFGM
NT seq 2136 nt   +upstreamnt  +downstreamnt
atgagtggtgaagaggagaagaaatgccctttgtgtgctgaagagatggattggactgat
cagcagttgaatccttgtaaatgtggttatgaggtgtgtgtttggtgttggcatcacata
atggacatggctgagaaggatgcaaccgaagggcggtgtcctgcatgtcggacaccttat
gacaaggatagggttgtagggttggaagcaaatttccaaagggtggttggcaatagttca
agtcaaaaacaaaaagtattaaagggaaaatcaaaaacaagtgaaagcagaaaagatctt
agcaatgttcgagtcattcaacgaaaaatggcgtacatcatcggactacctcttgatctt
gctgatgaagatttattgcagcggaaagattattttggtaaatatggaaaagtaacaaag
gtttctctttctcggacggcgggtggggcccttcagcagtttgtcaatgatacttgcagt
gtatatattacttactcaaaagaggaggaagccgtgacgtgcattcagtctgtacatggt
tatgtcttggatggtagaccgttaaaagcgtcatttgggactgcaaagtattgtcatgca
tggttgcggaatacgccttgcaacaatcctacatgtttatatttgcatactattggtgct
gaagaagatagttttggtaaagatgaagcggctgcagttcatactaggaatagagttcag
gaaatagtcggtagtaccaaatatgtgcatagacgctccggaagtacgttgccaccacct
gtagttgagcaatttaatcacaatgcttcagctgaggatcctgtgtatgatggcatgaaa
gatgttggttatgcacctatcaaaccgtcaaaagaagcgacaacatttgtagatatggtg
tgctctgatagtaagcatgtagagattgaacgctcagattcagttcaatatacatcatca
aaccctaaccaatttgttgattcaccgacttttgatgataaaaagtcaaaggactctttt
aagaactacagtgatccttggtatgatactgaaaatgataaccagattagtgcagatcat
tacgttctaaacagttatgtagatgaggaagataacagtaacatacaaccgtcgcaatat
acggattcgacattgaacgatgggtacaacgaaaacaaatttcaaagcttagctaaatca
gataagatatacagaggcgcgaactcgttttcgaatgaagagattgtggagcatttgaga
cggcttgatcatgatgcacctctagtagatgatgacgaagattctgctgctttggagagt
agtataatatccaatattttgtccatagatttagacggtgatgattcaccgtaccctcaa
acggttgcaggattgctgcaaccgaaagatgcgcgttcttggaactttcaaaataatgat
cagtccatattctcgtttgcaaatgaacatcggttttctggtcagcaaaatgatctaagc
actagcaccattgcatctagggtacagaactcgacaccgccaggattttcggcgaccata
aagccgccacctggtttttcctcctgcatgagagctgaacaggctgttgctgctggctca
ggaaattatatgaggaccggaccaaacgcactttacggttcaccatttttggggaatcta
tacaacatcaacggcgatgtcggaaaattatcaacgaactttttgaacaactcctggagc
agttcgtttgatgaggacacaaaaccgtggctttttatgcaacagcaatccgtacctcag
ttttctcaaccgacaatgttgcagccgcaacaacatacaacgccccagtttccttctcag
gttgatttgtatggcggtcttacttccgggctagcggatctacatcaccagagctacaac
tctacaccgtctttgtttacgcaacagccgaaatttgaaggtggtgggtttcagcagcat
aacccgttgcaggaggttcaagttcaacaacagggtggtactagaggtgaggtacaaaaa
tatgggtttgacagtttgttgtcggattatggtgactatatgttccaaacgcccacttcg
ggcgatttatacaccccccgggtatttggaatgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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