KEGG   Helianthus annuus (common sunflower): 110889320
Entry
110889320         CDS       T05101                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03020  RNA polymerase
han03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110889320
  09124 Replication and repair
   03420 Nucleotide excision repair
    110889320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110889320
   03400 DNA repair and recombination proteins [BR:han03400]
    110889320
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110889320
  RNA polymerase III system
   RNA polymerase III
     110889320
  RNA polymerase I system
   RNA polymerase I
     110889320
DNA repair and recombination proteins [BR:han03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110889320
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C Mrr_cat
Other DBs
NCBI-GeneID: 110889320
NCBI-ProteinID: XP_021992524
Position
10:complement(169273234..169278071)
AA seq 224 aa
MSVSDEEITRLHRVRKTCFEMLRDRGYEVEDSEIQMSRKEFIDKHNGVIRREDLTFLKSK
PGNTDQIYVFFPDDLKIGVKIIKNYVIRMENEGVRRAIVVVRVGLTPSAKACQTEIAGRF
QVEAFQEAELLVNIRYHDLVPEHLPLTNVEKKALLDQYTVKEAQLPRILASDPVARYYGL
RRGQVVKILRPIETGTSEKDKDDFDSNKRDRKEEICYVTYRIVG
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtcggtatccgacgaagaaataacgaggctgcatagagtccggaaaacatgttttgag
atgctgagagaccgtgggtacgaggttgaagattcagagatacaaatgagtagaaaagag
ttcattgacaagcataatggagttattagaagggaagacctaactttccttaagtccaaa
ccaggcaacactgatcagatctatgttttctttcctgatgatctgaagattggtgtgaag
ataatcaagaactatgtaatccgtatggaaaatgagggcgtacgaagagcaatagtagtg
gttcgagtaggtttaactcccagtgccaaggcatgccagactgagatagccggaaggttc
caagtggaggcttttcaggaagcagagctgctagtaaacatccgatatcatgatcttgtt
cccgaacatctcccgcttacgaatgtggaaaagaaagctttgctggatcaatacaccgtc
aaagaagcccagttacctagaattttggcttcagatccagtcgccagatattatgggtta
aggcgcgggcaagttgttaagattctgagaccgattgagacggggactagcgagaaagac
aaggatgactttgactccaataaaagagaccgtaaagaagagatctgctatgtcacttac
agaattgtcggctga

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