KEGG   Helianthus annuus (common sunflower): 110890946
Entry
110890946         CDS       T05101                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03082  ATP-dependent chromatin remodeling
han03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110890946
   03083 Polycomb repressive complex
    110890946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:han03036]
    110890946
Enzymes [BR:han01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110890946
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110890946
   HDAC complexes
    Sin3A-HDAC complex
     110890946
    BRAF-HDAC complex
     110890946
    REST complex
     110890946
    SHIP complex
     110890946
    MiDAC complex
     110890946
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110890946
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110890946
  Chromatin remodeling factors
   NuRD complex
    110890946
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110890946
NCBI-ProteinID: XP_021994279
Position
11:169181511..169187730
AA seq 430 aa
MRSKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLQRINPDTQHLFPEEMAKFKLGEDCPVFDDMFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGNLFFPGSGDVKEIGEREGKFYAINVPLKDGIDDSSFTRLFKT
IISKVVETYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFGLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPDEIPDNDYIKYFAPECSLRIPTAHIENFNSKSYLGTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEKNPDERIDQHTRDKQVQRDDEYYEGD
NDNDHNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcggtcaaaagatcgaatttcatacttctacgatggagacgttggtaatgtttacttt
ggaccaaaccatccaatgaagccgcatcggttatgtatgactcatcatttggtgctctcg
tatgatcttcacaaaaagatggaaatttataggcctcacaaggcatatccggttgagcta
gcacagtttcactcggctgattatgtggagttcttgcagcggataaaccccgacacacaa
catttgtttccagaagaaatggcaaagtttaaacttggagaagattgccccgtctttgat
gacatgtttgaattttgccaaatatatgctggtggaacaatcgacgctgcacgaagatta
aataatcagctttgtgacattgccataaattgggccgggggattacatcatgctaaaaag
tgtgaagcatcgggattttgttacatcaatgatttagtgttgggcattttggagcttcta
aagtatcacgcacgtgttctgtatattgatatcgatgtgcatcatggtgatggtgtagaa
gaagcattttacttcaccgacagggtgatgactgtaagttttcacaagtacggaaatctg
ttctttcccggatcaggtgatgtaaaggaaattggggagcgagaaggaaagttctatgca
attaacgttcctttaaaggatggcatagatgacagcagctttacacgtttgtttaaaaca
ataatttcaaaggttgttgaaacatatcaaccgggtgtgatcgttctccagtgtggagca
gattcgctcgctggggaccgcttaggctgcttcaacctctctatagacggacatgctgaa
tgtgttaggattgtaaaaaaatttggtttgcctctgctggtaactggaggtggaggatat
accaaagagaacgttgctcggtgctggactgttgaaacaggagtgcttttagatacagag
cttcctgatgagatcccggataatgattatatcaagtatttcgctccggagtgttcgtta
aggattccaactgctcatatcgaaaattttaatagcaaatcatacctaggaactataaag
atgcaagttctagaaaatcttcgatgcattcaacatgctccaagcgtacagatgcaagag
gttccacctgatttctatattcctgattttgacgaagatgagaagaaccctgatgaacga
atcgatcagcatacacgggacaaacaagttcaacgtgatgatgaatactacgaaggagac
aacgacaacgatcataacatggatgatgtttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system