KEGG   Helianthus annuus (common sunflower): 110898467
Entry
110898467         CDS       T05101                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
han  Helianthus annuus (common sunflower)
Pathway
han03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:han00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110898467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:han03021]
    110898467
   03036 Chromosome and associated proteins [BR:han03036]
    110898467
Transcription machinery [BR:han03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110898467
   Coactivators
    SAGA/TFTC/STAGA complex
     110898467
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110898467
    STAGA complex
     110898467
    TFTC complex
     110898467
    SAGA complex
     110898467
    SLIK complex
     110898467
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone
Other DBs
NCBI-GeneID: 110898467
NCBI-ProteinID: XP_022000944
Position
13:complement(86508433..86511937)
AA seq 554 aa
MDQTPPLPPPSEPPPPTTTTTINTPPTATPSTTSPEPPPPPQPQPQSQPQTPTPTPTPPT
TTSSSPQPLPQSPSPSPNPNPNPKPPNLPTSQPLPPQPLNPMSRPQFNRPYSPFPHFSSM
TNHSTASSSSISSIPPAQRGGMALGVPAHPSPQPPTSFSSLTPPSFGSQFGGLGRPAVPD
SVASTSAPQVRQSISGMPGVGMMGSLGSSSSLRASGVTASLPQRPLQSSLRPPTSANNQS
PATQNFQDHSHLRHPSVGSPGSPAPTTPQNTPSHNQPWLSSGTQGKPPLPPASFRPQMGP
QTLQQRSHMPPQQQTAMSASTQQPQAQASSSLQSQPSSLSQQPQEQHYSLPPSRVPQTLT
HQQQMARNRGLGNQRPFAPGTGQSSPVTPTPAFNKPPPAVEPPEPCNRIISKRSIQEIVA
QIDPAERLDPEVEDILVDIADDFVESVTTFACSLAKHRKSNTLESKDILLHLEKNWNMSL
PGFSGDEIKCYKKPFGNDVHRERLAAIKKSIAAAETPSSKSSGGQAAGGGAKGHPAKAPG
LVIGSPNPKVRETA
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggatcaaacaccaccactaccaccaccgtcagaaccaccaccacccaccaccaccacc
accatcaacactccgcctaccgctacaccctccaccacctcacccgaaccaccaccacca
ccacaaccacaaccacaatcccaaccccaaacaccaacaccaacaccaacaccaccgaca
accacctcatcctcgccacaacccctcccccaatccccatccccatcaccaaaccctaac
cctaaccctaaacccccaaatctcccaacatcacaaccactaccaccccagcctttaaat
ccgatgtcaagacctcaattcaaccgtccgtattctcccttccctcacttctcttcaatg
accaatcattccactgcttcttcttcttctatttcttccattcctccggcgcaaagaggc
ggaatggcgttgggtgttcctgcgcatccttcgccccagcctccgacttcgttttcgtct
ttgactccaccctcgtttggctcgcagtttggtggtttaggtcgtcctgctgtacccgat
tctgttgccagtactagtgctccacaggtaaggcaatctatatctggaatgccgggtgta
ggaatgatgggctctctcggttccagttcttctttacgggcaagcggtgttactgcatcg
cttccgcagagacctctccaatcatctcttagaccgccaacaagcgctaataatcagtcg
ccagccacacaaaatttccaagatcacagccatttacgacacccatcggtgggatcaccg
gggtcaccagcaccaaccacaccacaaaacacaccgtcacataaccaaccatggttatcc
tccggaactcaaggaaagccaccgctaccacccgcatcattccgaccgcaaatgggtccg
caaacattgcagcagaggtcccacatgccacctcaacaacaaactgccatgtcagcatca
acgcagcaacctcaagctcaagcatcctcgtctttgcagtcacagccatcttcattgtcg
cagcagccgcaagagcagcattactcgttaccaccgtcacgggtaccgcaaactttgacc
catcaacaacagatggcgaggaaccgcgggttgggtaaccaaagaccgttcgctcctggt
accggtcagtctagcccggtcacaccaacacctgcttttaacaaaccgccacctgctgtg
gagccccccgagccttgtaacaggattataagcaaacgaagcatccaagagatagttgct
cagattgatccagctgaacggttagatcctgaagtggaagatatcctcgttgatattgct
gatgattttgttgaatccgttacaacctttgcttgttctttagccaaacatcggaaatca
aatacgctggagtccaaggacattcttcttcatctggaaaaaaactggaacatgagtctt
cctgggttcagtggagacgaaattaagtgctacaagaaaccatttggtaatgatgttcac
cgagagcgcctggctgcgataaagaagtcgattgctgctgctgagacaccaagttcaaag
agttcgggtgggcaagctgccggtggtggtgctaaaggtcatccagcaaaggcgcctggt
cttgttattggttccccaaacccgaaggttagggaaactgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (85)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (95)   

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