KEGG   Helianthus annuus (common sunflower): 110927145
Entry
110927145         CDS       T05101                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
  KO
K11594  ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
Organism
han  Helianthus annuus (common sunflower)
Brite
KEGG Orthology (KO) [BR:han00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:han03019]
    110927145
   03041 Spliceosome [BR:han03041]
    110927145
   03036 Chromosome and associated proteins [BR:han03036]
    110927145
Enzymes [BR:han01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110927145
Messenger RNA biogenesis [BR:han03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     110927145
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110927145
Spliceosome [BR:han03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    110927145
Chromosome and associated proteins [BR:han03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    110927145
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 110927145
NCBI-ProteinID: XP_022026451
Position
2:complement(170010071..170014181)
AA seq 638 aa
MPTSWADSVDAAEKAAAGGSYSVANSNSSSLSRNRPTYVPPHLRNRPSSSEAAVAPPPAV
ANSGPTSAAPAVGGGGGVGGGGGNRWAAPRNDFRSGYASGGRGGGGWNNRGGGWDRGRSR
EVNPFGDDDGTEQPFVEQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNI
RRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQFGQRASRMP
RTACPLALILSPTRELSCQIHEEAKKFAYQTGVRVVVAYGGAPINQQLRELERGVDILVA
TPGRLVDLLERARVSLQYIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS
ATFPKEIQRLASDFLANYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANG
VHGKQALTLVFVETKKGADSLEYWLCMNGFPATTIHGDRTQQEREQALRSFKSGNTPILV
ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDNNASMARPL
SDLMQEANQEVPAWLARYAARASYGGGKNRRGGGRFGGRDFRRDSNFNRGGGGGGDYYGG
GNMNNAYGGSGGYGGGYGASGGYGGGGGYGPGVASAWD
NT seq 1917 nt   +upstreamnt  +downstreamnt
atgccaacttcttgggctgattcagttgatgcagctgagaaagcagctgctggtggttcg
tatagtgtagcgaattcgaattcaagttcgttatcccgaaaccgaccgacatacgttccg
ccgcacctgcgtaacaggccgtctagttcagaggcggcagtggcaccaccgccagctgta
gccaacagtgggcctacttctgctgctcctgctgtcggtggcggtggcggcgttggcggt
ggcggtggtaatcgttgggctgctcctagaaacgactttaggtccgggtacgctagtggt
ggacgcggtggcggtggttggaacaatcggggtggtggttgggaccgtggaagaagtcgt
gaggttaacccttttggagacgatgatggtacggaacaaccgtttgttgaacaggagaat
accgggattaacttcgatgcgtatgaagacattcccgttgagacaagtggcgacaatgtg
ccgccacctgtcaacacttttgccgagattgatttaggtgaagcgcttaatttgaacatt
aggagatgcaagtatgtgaaaccaacaccagttcagcgccacgcgataccgatctcgctt
ggtggtagggatttgatggcgtgtgcgcaaacagggtccggaaaaactgctgcgttttgt
tttccgattattagtggaataatgcgggggcagtttggtcaaagagcgtcgcggatgcct
cgtacagcgtgtccacttgctcttattctgtcaccgacaagggagttatcatgtcaaatt
catgaagaagctaagaagtttgcttatcaaaccggggtaagggtggttgttgcttacggt
ggagccccaattaatcaacagcttcgtgaactagagagaggtgtcgacattctcgttgca
acccctgggcggttggtagatttgttagagcgggcccgtgtatccctacaatacatcagg
tatttagcgttagatgaagctgacagaatgcttgatatgggtttcgaaccgcaaatacga
aaaattgttcagcaaatggacatgcctccgccaggtgtcagacaaacaatgttattcagt
gccactttccccaaggagatacagagattggcgtctgattttcttgcaaattatatattt
ttggctgtggggcgagtgggttcaagtacggatttgattgttcagagagttgaatatgta
caagaaagtgataaaagaagccaccttatggatcttttacatgcacaacgggccaatggt
gttcatggcaagcaagcgcttacattagttttcgtagagacgaaaaaaggtgccgattca
ctagagtattggttatgtatgaatggcttccctgccactactattcatggtgatagaaca
caacaggaacgtgagcaggcgttaagatcattcaaaagtgggaacacaccgattttggtt
gcaacagacgtagcagcacgaggtctcgacattccacacgttgcccacgtggtcaacttt
gacctaccaaacgacatcgatgactacgtgcaccgtataggaagaacgggccgggctgga
aagtcaggcctagccactgctttctttaacgacaataacgcctcgatggctagaccgtta
tcagatcttatgcaagaagctaaccaagaagttccagcttggctggctcgttatgccgct
cgagcttcttacggcggcgggaagaaccgccgtggcggtggtcggtttggcggccgtgat
ttccggagagactcaaatttcaaccgtggtggcggcggtggtggtgattattatggtggt
gggaatatgaataacgcttatggaggttctggcgggtatggcggcggttatggagcttct
ggcgggtatggtggcggcggtggttatggtcccggtgttgccagtgcttgggactga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system