KEGG   Halanaerobium hydrogeniformans: Halsa_1894
Entry
Halsa_1894        CDS       T01349                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
has  Halanaerobium hydrogeniformans
Pathway
has03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:has00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Halsa_1894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:has03021]
    Halsa_1894
   03400 DNA repair and recombination proteins [BR:has03400]
    Halsa_1894
Enzymes [BR:has01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Halsa_1894
Transcription machinery [BR:has03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Halsa_1894
DNA repair and recombination proteins [BR:has03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Halsa_1894
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF4559 RAD51D_N zf-ZPR1
Other DBs
NCBI-ProteinID: ADQ15312
UniProt: E4RJ92
Position
complement(2098656..2099600)
AA seq 314 aa
MIEIEKPRVERLESDDNYGRYEISPLERGYGTTLGNSLRRILLSSLPGAALTSVKVEGVK
HEFSAISGVVEDMTDLILNLKEVVVKFSGEEQSTIRIEAEGEGEVTAGDFITSGDVQVIN
KDHHIATLAEDGRLLLEATVEKGRGYHTAEENKDHFDKVIGLIPIDSSFSPIERANFNIE
NTRVGQVTDYDRLILEVKTNGSIHPDDAISLAAKIMVEHLELFINLTDEIEDVEIMVEVE
EEEKDKILDTTIEELELSVRSSNCLKRAGINTVEELVDKTEDDLMKVRNLGKKSLQEIKD
KLDELELELKDTEI
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaaattgaaaaaccacgtgtggaaagacttgaaagtgatgataattacggacgt
tatgaaatttctcctctggaaagaggttatggtactactttaggtaattctctgcgcaga
attttattgtcttctttaccgggagctgctttaacatcggttaaagtcgaaggagtaaaa
catgaattctcagctatttctggtgttgtagaggacatgacagatttaatcttaaatctg
aaagaggtagttgttaaattttccggtgaagagcagtcaactatcaggattgaagcagag
ggagaaggagaagtgacagctggtgactttattacctcaggtgatgtccaggtaataaat
aaagatcatcatattgcaactctagcagaagatggcaggctacttttggaagctactgta
gaaaaaggtagaggttatcatactgcagaagaaaataaagatcattttgataaagttata
ggtttaatccctattgattcttcatttagccctattgaaagagctaattttaatattgaa
aacactagagttggccaggttactgattatgatagattaattttagaagtaaaaactaat
ggtagtattcatccagatgatgcaattagtcttgcagctaaaatcatggtagagcattta
gaattgtttattaatttaacagatgaaattgaagatgttgaaatcatggttgaagttgaa
gaagaggaaaaagataaaattcttgatactacaatagaagagttagaattatcagttcgt
tcttctaattgcttaaaaagagctggaattaatactgttgaagaacttgttgataaaaca
gaagatgatctaatgaaagttcgtaatttaggtaaaaagtctttacaggagataaaagat
aaacttgatgaacttgaattagaattaaaagatactgaaatataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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