KEGG   Halothiobacillus sp. LS2: A9404_05805
Entry
A9404_05805       CDS       T04441                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
haz  Halothiobacillus sp. LS2
Pathway
haz03030  DNA replication
haz03410  Base excision repair
haz03420  Nucleotide excision repair
haz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:haz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A9404_05805
   03410 Base excision repair
    A9404_05805
   03420 Nucleotide excision repair
    A9404_05805
   03440 Homologous recombination
    A9404_05805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haz03032]
    A9404_05805
   03400 DNA repair and recombination proteins [BR:haz03400]
    A9404_05805
Enzymes [BR:haz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A9404_05805
DNA replication proteins [BR:haz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A9404_05805
DNA repair and recombination proteins [BR:haz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     A9404_05805
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A9404_05805
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_pol_lambd_f
Other DBs
NCBI-ProteinID: ANJ68311
UniProt: A0A191ZK79
Position
complement(1306223..1308970)
AA seq 915 aa
MSDHKPLILVDGSSFLFRAFHALPPLTGPEGFPTGAIHGVINMLQKLRREEAPAQMAVVF
DAPGPTFRDDIYPEYKAHRPPLPDDLRVQIAPLHELVEALGYPLLCVPGVEADDVLGTLM
RAAHETGIPVLLATADKDFAQLVTPGVRLMNTMTNTTLDAAAVEAKYGVTVAQFIDYLAL
VGDTVDNVPGVPGCGPKTAAKWLNQWGSLDALMAHADEVKGKVGESLRASLAFLPVARDL
VTIRTDCALDIGEGDLNLRAPDADRVRALAERYGLNTLRRQFSEATKEMADDPEAGARSP
SAEPGQASLDLPEADTAYETILTRDAWDIWREKLSAAPLVAFDTETDSLDLFRARIVGVS
FAVARGGAAYLPLAHDYPGVPEQLDRERVLAELKPWLEDARRPKILQNAKFDSHVLANHG
ITLRGVAFDTMLESYVLDSTASRHDMDSLAAKYLSRTTITFEEVAGKGAKALTFDQIHLE
QAAPYAAEDADVTFQLHQTLWPRLEQGGRLKTVYEEIELPLIPVLCAMERVGVLVDRQQL
AEQGAVIGARIEAIEQEAIQVAGRPFNLGSTKQLKELLFDELQLPVVKKTPKGEPSTDEE
TLSELADRHPLPALILDYRGLTKLKSTYIDRLPEEIHPDTGRVHSAFHQAVTATGRLSSS
NPNLQNIPIRSEEGRRIRLAFVAAPGKTLIAADYSQIELRIMAHLSGDERLVAAFARGED
IHRATAAEVFGLEESAVSDNQRRAAKAINFGLIYGMSAFGLAKQLDVGRAEAQDYIDRYF
ARYPGVADYMERMRQLARRQGYVETLFGRRLYLPEIHSRNGQRRQYAERTAINAPMQGTA
ADIIKRAMIRLHALLVETDKAALILQVHDELVFEVPTDAVDSVREIIRQEMSQAADLHVP
LEVGIGIGHSWAEAH
NT seq 2748 nt   +upstreamnt  +downstreamnt
atatccgatcataaaccgttgattctggtcgatgggagttccttcctgttccgggcgttt
catgccttgccgccgttgaccggtccagagggttttcccaccggtgccatccatggcgtg
atcaacatgctgcagaaactgcggcgtgaggaagccccggcgcagatggccgtggtcttc
gatgcgccggggcccaccttccgcgacgatatctatcccgagtacaaggcccatcggccg
ccgttgccggacgatcttcgggtgcagatcgcgcccctgcacgaactcgtcgaggcgttg
ggttatcccctgctgtgcgtgcccggagtggaagccgacgacgtgctcggtaccctcatg
cgtgccgcgcacgaaacgggcatccccgtgctgctggcgacggccgacaaggatttcgcc
cagctggtgacgccgggtgtccggctgatgaacaccatgacgaacacgaccctggatgcg
gcggcggtcgaagccaaatacggcgtgacggtcgcgcaattcatcgattacctggcgctg
gtcggcgatacggtggacaacgtgcccggcgtccccggctgcgggcccaagacggcggcc
aaatggctcaatcagtggggcagtctggacgccctgatggcgcatgccgacgaggtcaag
ggaaaggtgggcgaatcgttgcgcgcgtccctggcgttcctgccggtcgcccgggatctg
gtgacgatccgcacggactgcgcgctggatatcggcgagggtgacctgaacctgcgtgcg
ccggatgccgaccgcgttcgtgcgttggccgagcggtacgggctgaatacgctgcgccgc
cagttctccgaggccacgaaggaaatggcggatgatccggaggcaggggctcggtcccca
tcggcggaaccggggcaggccagtctggatttgcccgaggcggacacggcctacgagacg
attctgacccgggatgcctgggatatctggcgcgagaaattgagtgccgcccccctggtg
gccttcgatacggaaaccgattccctggatctgttccgtgcacgcatcgtgggcgtttcc
tttgcggtcgcgcgcggcggggccgcctacctgcctctggcgcacgactaccccggtgtg
cccgaacagctggaccgggagcgggtgctggcggaactcaaaccctggctcgaagatgcc
cggcgtccgaagatcctgcagaatgccaaattcgacagccatgtgctggccaaccacggt
atcacgctgcggggtgttgccttcgacaccatgctggagtcgtatgtgctggattccacc
gcatcccggcacgacatggattccctggccgcgaaatacctcagccgtacgacgatcacc
ttcgaggaagtcgccgggaaaggggcgaaggcgctgacattcgaccagattcatctcgaa
caggcagcgccctacgccgccgaagatgcggacgtcacctttcagctgcatcagaccctc
tggccgcgcctcgagcagggcggccgcctgaaaacggtttatgaagagatcgagttgccc
ctgattccggtgttgtgcgccatggagcgggtcggcgtgttggtggatcggcagcagttg
gccgagcagggtgccgtgatcggcgcccggatcgaggccatcgaacaggaagccatccag
gtggccggtcgacccttcaatctgggatcgaccaagcagctcaaggaattgctgttcgac
gaactccagttgccggtggtgaagaagaccccgaaaggcgaaccgtccaccgatgaggag
actctgtcggaactggcggaccggcacccgttgcccgcactgattctcgattaccggggg
ctgacgaaactgaagagcacctacatcgatcgcctgccggaggagatccaccccgacacc
ggacgggtgcacagtgccttccaccaggcggtgacggccacggggcggttatcttcatca
aatccgaacctgcagaacattccgattcgcagcgaggaagggcgtcggatccgcctggca
ttcgtggcggcgcccggcaagacgctgatcgcggcggactattcccaaatcgaattgcgc
atcatggcgcatctgtccggcgatgaacgcctcgtggccgcctttgcacgcggcgaggac
atccaccgtgcgacggcggccgaggtcttcggtctcgaggagtcggcggtcagcgacaac
cagcggcgggccgccaaggcgatcaatttcggcctgatctacggcatgtcggccttcggc
ctcgccaagcagctcgacgtggggcgggccgaggcgcaggactacatcgatcgctacttc
gcccgctatcccggggtggccgattacatggaacggatgcgtcagctggcgcggcggcag
ggctatgtggaaactctgttcggtcgtcgtctctacctgcccgaaatccacagccggaac
ggtcaacggcgccagtatgcggaacgaaccgcgatcaacgcgccgatgcagggcacggcg
gccgacatcatcaagcgcgccatgatccgactgcacgcgttgctggtggagacagacaag
gcggccctcatcctgcaggtgcacgacgaactggtcttcgaagtgccgacggatgccgtt
gattcagtccgggaaatcattcggcaggaaatgagtcaggcggccgatctgcatgttcct
ctcgaagtcgggatcggcatcgggcacagttgggccgaggcccattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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