KEGG   Halomonas chromatireducens: LOKO_03061
Entry
LOKO_03061        CDS       T04292                                 
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
hco  Halomonas chromatireducens
Pathway
hco03030  DNA replication
hco03430  Mismatch repair
hco03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LOKO_03061
   03430 Mismatch repair
    LOKO_03061
   03440 Homologous recombination
    LOKO_03061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hco03032]
    LOKO_03061
   03400 DNA repair and recombination proteins [BR:hco03400]
    LOKO_03061
Enzymes [BR:hco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOKO_03061
DNA replication proteins [BR:hco03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LOKO_03061
DNA repair and recombination proteins [BR:hco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LOKO_03061
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: AMD02108
UniProt: A0A125R0J2
Position
3265248..3265703
AA seq 151 aa
MTQVDFYILPDTTLEARLDFACRLAETIAGKGYRLHLHAEDEAMARDLDDRLWTFRPDAY
LPHALVDSTLLGSDMADSVAVTIGWEHPPEPVPDTPMAMLNLDPGIPEWFSRFDRVAEII
NQHQQVLTAKRECWQTYKQRGYPVKAHQLRG
NT seq 456 nt   +upstreamnt  +downstreamnt
atgacccaggtagacttttacatccttcccgacaccaccctcgaggcacgcctcgacttc
gcctgccgcctggccgagaccatcgccggcaagggctaccggctgcacctgcacgccgag
gacgaggccatggcccgcgacctcgacgacaggctgtggaccttccgccccgacgcctac
ctgccccatgcccttgtggacagtacccttctcggcagcgacatggctgacagcgtggcg
gtgaccatcggctgggagcatccccccgaaccggttcccgatacacccatggcgatgctc
aacctcgaccccggcatccccgagtggttctcgcgcttcgatcgggtcgccgagatcatc
aaccagcaccagcaggtgctcaccgccaagcgcgagtgctggcagacctacaagcagcgc
ggctatccggtaaaggcgcatcagcttcgcggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system