KEGG   Hippocampus comes (tiger tail seahorse): 109515248
Entry
109515248         CDS       T04969                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit DSS1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03050  Proteasome
hcq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    109515248 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    109515248 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109515248 (sem1)
   04131 Membrane trafficking [BR:hcq04131]
    109515248 (sem1)
   03051 Proteasome [BR:hcq03051]
    109515248 (sem1)
   03400 DNA repair and recombination proteins [BR:hcq03400]
    109515248 (sem1)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     109515248 (sem1)
Membrane trafficking [BR:hcq04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    109515248 (sem1)
Proteasome [BR:hcq03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     109515248 (sem1)
DNA repair and recombination proteins [BR:hcq03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     109515248 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 109515248
NCBI-ProteinID: XP_019724470
Position
Unknown
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcggacaaaaagcagaccgtcgacctcggtctactcgaggaggacgacgagtttgag
gaattcccagctgaagactggaccgggttggacgaggatgaagacgctcatgtttgggaa
gacaactgggacgacgacaacgtcgaggatgatttctccaaccagttaagagcggagctg
gaaaaacacggttacaagatggagacgtcctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (51)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (66)   

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