KEGG   Hippocampus comes (tiger tail seahorse): 109515629
Entry
109515629         CDS       T04969                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03030  DNA replication
hcq03410  Base excision repair
hcq03420  Nucleotide excision repair
hcq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109515629 (rfc3)
   03410 Base excision repair
    109515629 (rfc3)
   03420 Nucleotide excision repair
    109515629 (rfc3)
   03430 Mismatch repair
    109515629 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcq03032]
    109515629 (rfc3)
   03036 Chromosome and associated proteins [BR:hcq03036]
    109515629 (rfc3)
   03400 DNA repair and recombination proteins [BR:hcq03400]
    109515629 (rfc3)
DNA replication proteins [BR:hcq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109515629 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    109515629 (rfc3)
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109515629 (rfc3)
DNA repair and recombination proteins [BR:hcq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109515629 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    109515629 (rfc3)
SSDB
Motif
Pfam: DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 Sigma54_activ_2 ABC_tran DNA_pol3_delta AAA_2 DUF5098 AAA_5
Other DBs
NCBI-GeneID: 109515629
NCBI-ProteinID: XP_019725095
UniProt: A0A3Q2Z766
Position
Unknown
AA seq 356 aa
MSLWVDKYRPTSLGKLDYHQEQASQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGYQDRVVIQELIKTMAQSQQ
IQASTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLVLCSTSTSKVIGPIRSRCL
AVRVPLPSTEEVCNVLTSVCKKEGLLLPPELAKRISDKSGRNLRKALLMCEACRVQQYPF
SADQDVTEPDWEVFLRETANYIVSQQTPQRLLEVRGRLYELLTHCIPADIIMKGLVRELL
NNCDGHLKPEVAHMAAYYEHRLQLGNKAIYHLEAFTAKFMAVYKKFMEDGLDGMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcttgtgggtggacaaataccgacccacgtccctcggtaaactcgactaccaccaa
gagcaagcttctcaactcaagaacctggttcaatgtggcgacttcccgcacttgttggtg
tatggtccttcaggcgcgggcaagaaaactcgcatcatgtgtctgctgagggagctctac
ggcgccggcgtggagaagcttcgcatcgagcaccagaccattgtggctccctccaagaag
aagattgagatcaacaccatcgccagcaactaccacttggaagtcaaccccagcgatgcg
ggttaccaggaccgcgtggtgatccaggagctgatcaagaccatggctcagtctcagcag
atccaagccagcacgcagcgagagttcaaagtggtgctgctcaccgaggtggaccgcttg
accaaggacgcccagcacgctttgcggcgcaccatggagaaatacatggccacctgccgc
ctggtgctctgctcaacctccacctccaaggtcatcgggcccatacgcagccgctgcttg
gccgttcgcgttccgctgcccagtacggaggaggtatgtaacgtcctcacgtcggtgtgt
aagaaagaaggtctcctcctgcctcccgagttggccaaacggatcagcgacaagtccggg
cgcaacctccgcaaagcgctgctgatgtgcgaggcctgcagggtgcagcagtaccccttc
tcggcggaccaggacgtcacagaacccgattgggaggtgtttctccgggaaactgccaac
tacattgttagccagcagactccgcagagattgttggaggtgcggggtcgtttgtacgag
ctgctgactcactgcatccctgctgacatcatcatgaagggtttggtgagggagcttctg
aacaactgcgacgggcacctgaagccggaggtggcgcacatggcggcgtactacgagcac
cggctgcagctgggcaacaaagccatctaccacctggaggccttcaccgccaagttcatg
gccgtctacaagaagttcatggaggacggcctagacggcatgatgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (32)   

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