KEGG   Hippocampus comes (tiger tail seahorse): 109517884
Entry
109517884         CDS       T04969                                 
Symbol
lig3
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109517884 (lig3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcq03400]
    109517884 (lig3)
Enzymes [BR:hcq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109517884 (lig3)
DNA repair and recombination proteins [BR:hcq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109517884 (lig3)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 109517884
NCBI-ProteinID: XP_019728916
UniProt: A0A3Q2XSQ8
Position
Unknown
AA seq 993 aa
MQRCFILLAKKTLCLRPLAPLAPRLRVAFWRLLAPHPESRHRSLLERHGGLRLSLPAPDA
MAEQRFLVEYAKRGTAGCKKCKDKIAKGMARIGKVVPNPFSESAGEMKEWYHIKCMFEKL
ERARATTKKIEDITDLEGWEELQDEDKELINRHVSELMSKVKSSPQKKTPAKSAASAKLT
SPAADAAASLNAPRKFSGFTAAKAGASPYTSSPLSSPSPAKQGSALAAQLCDPHHKDCLF
REFRKLCATVAENNSYNSKTQIIEKFLRKGTGGDKFHGDLYLTVKLLLPGVVKSVYNLND
KQIVKLFSRVFRCSQDDMVRDLEKGDVSETVRMFFEDSKAFPPSAKSLLTIQEVDASLTR
LAQLTKEDEQQAELEDVAKKCTGNDLKGIIRLIKHDLKMNAGAKHVLDAVDPNAYDAFKA
SRNLADVIERVLRNQQEASDGSGPRKLLTVEASLMTPVQPMLAEACKSIEYAMKKCPNGM
YSEIKYDGERVQVHKSGDSFSYFSRSLKPVLPHKVAHFKDYIPRAFPGGHSMILDAEVLL
IDTNTSKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNGNSLMERPLSERRKFLHDNMVE
VPNRILFSEMKHVTRARDLADMITRVIREGLEGLVLKDVKGSYEPGKRHWLKVKKDYLNE
GAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPDSKKWCTVTKCSGGYDDAMLARLQK
ELDVVKISKDPSKIPGWLKIVKNYYPDFLIRSPEQAPVWEITGAEFSKSEMHTADGISIR
FPRMTRVRDDKDWKSATNLPQLKELYRISKENCDFQVTAGPSGQDKAESAGDSGGSSPAS
ESTLPKKASNSTPAKRKAVKSEPSSPAIKAPAPKKVRKSAESVQSNGHAGTAKVTATPPP
TPRMLESNDDKTLLDIFSGIKLFLPSGVDDFAKLRRYFVAYDGDLVADYDAASATHTLAD
NQEGDGEGASRARRVTPGWIWECIRKRRVVAPC
NT seq 2982 nt   +upstreamnt  +downstreamnt
atgcagaggtgcttcattttgctagccaagaagaccctctgccttcgccccctcgcaccc
ctcgcccctcggctccgggtggccttttggcggctcctcgccccgcaccccgagtcccgt
caccgcagccttctcgagcgtcacggaggcctccggctctccttgcccgcgcccgacgcc
atggcggagcagcgtttcctggtggagtacgccaagcgcggaacagccggctgcaagaag
tgcaaggacaaaatcgccaagggcatggcgcgcatcggcaaggtggtgcccaaccccttc
agcgagtcggccggcgaaatgaaggagtggtaccacatcaagtgcatgtttgaaaagctg
gaacgcgcccgtgccacgaccaagaagatcgaggacatcaccgacctggagggctgggag
gagctgcaggacgaggacaaagagctcatcaaccgacacgtctctgagttgatgtccaaa
gtaaagtcgagtccgcagaagaagaccccggccaagtcggccgcttcggccaaactgacg
tcacctgctgccgacgccgcagcctcgctcaacgcgccgcgcaagttctcagggttcacc
gcggccaaggcgggcgcctccccgtacacgtcctcacccctgtcgtcgccgtcgcccgcc
aagcagggcagcgctctagccgcgcagctgtgcgacccgcaccacaaggactgcctgttc
cgcgagttccgcaagctgtgcgccacggtggccgagaacaacagctacaacagcaagacg
cagatcattgagaagttcctgcgcaagggcaccggcggagataaattccacggtgacttg
tacctgacggtgaagctgctgctgcccggcgtggtgaagagcgtgtacaacctcaacgac
aagcagatcgtcaaactcttcagccgcgtgttccgctgcagccaggatgacatggtgcga
gatctggagaagggcgacgtgtcggagacggttcgcatgttcttcgaggacagcaaagct
ttcccgccgtcggccaagagcctgttgaccatccaggaggtggacgcctcgctcacccgc
ctggcacagctcaccaaggaggacgagcagcaggcggagctggaggacgtcgccaaaaag
tgcaccggcaacgacctgaaaggcatcatccgcctcatcaagcacgacctgaagatgaac
gccggagccaagcacgtactggacgcggtggaccccaacgcctacgacgccttcaaggcc
tcccgcaacttggccgacgtgatcgagcgcgtgctgaggaaccagcaggaggcctcggac
ggctcggggccccgcaagctgttgaccgtggaggcctcgctcatgacgcccgttcagccc
atgctggcggaggcgtgcaaatccatcgagtacgccatgaagaagtgccccaacggcatg
tactcggagatcaagtacgacggtgaacgcgtgcaggtgcacaagagcggcgacagcttc
agctacttcagtcgcagcctcaaacccgtcttgccgcacaaagtggcacacttcaaggac
tacatcccgcgggcgttccccggcggccacagtatgattttggacgccgaggtgctgctc
atcgacaccaacaccagcaagccgctccccttcggcacgctgggcgtgcacaagaaagct
gcttttcaagacgccaacgtctgcctctttgtttttgactgcatatacttcaatggcaac
agtctcatggaaaggccgctgagcgagcgcaggaagttcctgcatgacaacatggtggag
gtgcccaaccggatcctcttttcggaaatgaagcacgtcacgcgtgcgagagacctggcc
gacatgatcactcgagtcatcagagaaggcttggaaggcctggtcctcaaagacgtgaag
ggctcgtacgagccaggcaagcgtcactggctgaaggtgaagaaggactacctgaacgag
ggcgccatggccgacacggccgacctggtggtgctgggcgctttctacgggaaaggctcc
aacggcggcatcatgtccagcttcctgatgggctgctatgacccggactccaagaagtgg
tgcactgtcaccaagtgctcgggcggctacgatgacgccatgttggctcgtctccagaaa
gagctggacgtcgtcaaaatcagcaaggaccccagcaagatccccggctggctgaaaatc
gtcaagaactactacccggatttcctcatccgcagtcccgagcaagcgcccgtgtgggag
atcacgggcgccgagttttccaagtcggagatgcacacggccgacggcatctccatccgc
ttcccccgcatgacgcgcgtccgcgacgacaaggactggaagagcgccaccaacctgccg
cagctcaaagagctgtatcgcatctccaaggagaactgcgatttccaagtgacggcggga
ccttctggccaagacaaggccgagtctgcgggagacagcggcggcagttcgccggcgtcc
gagagcaccctgcccaagaaagcgagtaacagcaccccggccaaacgcaaggcggtgaaa
tccgagccgagctctcccgccatcaaagctcccgcccccaaaaaggtgaggaagagtgcg
gaaagtgtgcagagcaacggacacgcgggaacggcgaaggtgacggcaacgccgcctcct
accccgcggatgctcgagtccaacgacgacaagacccttctggacatcttcagcggcatc
aagctcttcctgccttccggcgtggatgattttgccaagctgcggcgttactttgtggct
tacgacggcgacctggtggcggactacgacgccgcctcagccacccacactctggccgac
aatcaggagggcgatggagagggcgccagccgggcccggcgggtgacgcccggctggatc
tgggagtgcatccgcaagaggcgtgtggtcgctccctgctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

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